PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2406
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Lusiscaffold2390138680.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2390138700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2390138890.1 Rosmarinic Acid C4H low borderline
Lusiscaffold240139040.1 Rosmarinic Acid C4H medium pass
Lusiscaffold240139120.1 Rosmarinic Acid C4H low borderline
Lusiscaffold250145760.1 Rosmarinic Acid C4H medium pass
Lusiscaffold250145780.1 Rosmarinic Acid C4H low borderline
Lusiscaffold250145790.1 Rosmarinic Acid C4H low borderline
Lusiscaffold250145800.1 Rosmarinic Acid C4H medium pass
Lusiscaffold250145810.1 Rosmarinic Acid C4H low borderline
Lusiscaffold250146250.1 Rosmarinic Acid C4H low borderline
Lusiscaffold250146300.1 Rosmarinic Acid C4H low borderline
Lusiscaffold250146460.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2510147580.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2510147590.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2610153080.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2610153090.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2670155800.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2720158910.1 Rosmarinic Acid C4H medium pass
Lusiscaffold2720159420.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2720160230.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2720160470.1 Rosmarinic Acid C4H medium pass
Lusiscaffold2720161180.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2720161740.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2720161910.1 Rosmarinic Acid C4H medium pass
Lusiscaffold27390164020.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2750164890.1 Rosmarinic Acid C4H medium pass
Lusiscaffold2790167300.1 Rosmarinic Acid C4H low borderline
Lusiscaffold280168280.1 Rosmarinic Acid C4H low borderline
Lusiscaffold280168480.1 Rosmarinic Acid C4H low borderline
Lusiscaffold280168700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold280168730.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2840178290.1 Rosmarinic Acid C4H medium pass
Lusiscaffold2840178330.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2840178340.1 Rosmarinic Acid C4H low borderline
Lusiscaffold28570178610.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2910181860.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2910181880.1 Rosmarinic Acid C4H medium pass
Lusiscaffold2910181890.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2910181900.1 Rosmarinic Acid C4H medium pass
Lusiscaffold2910181910.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2910181970.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2910181980.1 Rosmarinic Acid C4H medium pass
Lusiscaffold2910183140.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2920185010.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2920186470.1 Rosmarinic Acid C4H low borderline
Lusiscaffold2940187930.1 Rosmarinic Acid C4H low borderline
Lusiscaffold300191540.1 Rosmarinic Acid C4H medium pass
Lusiscaffold300192010.1 Rosmarinic Acid C4H low borderline
Lusiscaffold300192030.1 Rosmarinic Acid C4H low borderline