PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold300192210.1 Rosmarinic Acid C4H low borderline
Lusiscaffold300192280.1 Rosmarinic Acid C4H low borderline
Lusiscaffold300192300.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3050197080.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3060197920.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3060198530.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3100203340.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3100204040.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3100205010.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3100205530.1 Rosmarinic Acid C4H medium pass
Lusiscaffold310200220.1 Rosmarinic Acid C4H low borderline
Lusiscaffold310200660.1 Rosmarinic Acid C4H low borderline
Lusiscaffold310200670.1 Rosmarinic Acid C4H low borderline
Lusiscaffold310200680.1 Rosmarinic Acid C4H low borderline
Lusiscaffold310200700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold310200720.1 Rosmarinic Acid C4H low borderline
Lusiscaffold310200730.1 Rosmarinic Acid C4H low borderline
Lusiscaffold310201920.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3190210010.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3190210170.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3190211100.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3190211110.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3250214090.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3250214110.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3250214120.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3250214130.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3270215050.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3270215210.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3270216090.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3270216890.1 Rosmarinic Acid C4H low borderline
Lusiscaffold330217380.1 Rosmarinic Acid C4H low borderline
Lusiscaffold340222710.1 Rosmarinic Acid C4H low borderline
Lusiscaffold340223710.1 Rosmarinic Acid C4H low borderline
Lusiscaffold340225150.1 Rosmarinic Acid C4H low borderline
Lusiscaffold340225380.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3460228800.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3460229400.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3490230660.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3490230670.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3490230690.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3490230710.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3490230720.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3490230740.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3490230750.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3490230760.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3490230790.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3490230800.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3530233600.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3530234220.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3580236560.1 Rosmarinic Acid C4H low borderline