PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold3590236800.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3590236970.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3720244600.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3730246060.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3760248900.1 Rosmarinic Acid C4H medium pass
Lusiscaffold3760249470.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3770252190.1 Rosmarinic Acid C4H low borderline
Lusiscaffold390255520.1 Rosmarinic Acid C4H medium pass
Lusiscaffold39100255660.1 Rosmarinic Acid C4H low borderline
Lusiscaffold3910255640.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4060256470.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4130257550.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4130257710.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4160259510.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4160260940.1 Rosmarinic Acid C4H medium pass
Lusiscaffold420265700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold420266290.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4300273250.1 Rosmarinic Acid C4H medium pass
Lusiscaffold430269850.1 Rosmarinic Acid C4H medium pass
Lusiscaffold430271700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold430272090.1 Rosmarinic Acid C4H low borderline
Lusiscaffold440275500.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4610281630.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4610281640.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4610281650.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4610281690.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4610281700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4610281710.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4620283470.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4640286360.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4640287690.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4640288190.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4640288400.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4640289780.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4680290660.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4730293950.1 Rosmarinic Acid C4H medium pass
Lusiscaffold4730293960.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4730293970.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4730293980.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4730293990.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4750297110.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4880301190.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4900303030.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4900303040.1 Rosmarinic Acid C4H low borderline
Lusiscaffold4980303930.1 Rosmarinic Acid C4H low borderline
Lusiscaffold5000305430.1 Rosmarinic Acid C4H medium pass
Lusiscaffold500304500.1 Rosmarinic Acid C4H medium pass
Lusiscaffold500304510.1 Rosmarinic Acid C4H low borderline
Lusiscaffold5050306870.1 Rosmarinic Acid C4H medium pass
Lusiscaffold5110309420.1 Rosmarinic Acid C4H low borderline