PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold5150310780.1 Rosmarinic Acid C4H low borderline
Lusiscaffold5240311980.1 Rosmarinic Acid C4H low borderline
Lusiscaffold5240312120.1 Rosmarinic Acid C4H low borderline
Lusiscaffold5400314930.1 Rosmarinic Acid C4H medium pass
Lusiscaffold5400314980.1 Rosmarinic Acid C4H low borderline
Lusiscaffold5400315220.1 Rosmarinic Acid C4H medium pass
Lusiscaffold5400315240.1 Rosmarinic Acid C4H medium pass
Lusiscaffold5400315370.1 Rosmarinic Acid C4H low borderline
Lusiscaffold5400315380.1 Rosmarinic Acid C4H medium pass
Lusiscaffold5400315390.1 Rosmarinic Acid C4H medium pass
Lusiscaffold5400315550.1 Rosmarinic Acid C4H medium pass
Lusiscaffold5400315670.1 Rosmarinic Acid C4H low borderline
Lusiscaffold570324020.1 Rosmarinic Acid C4H medium pass
Lusiscaffold570324450.1 Rosmarinic Acid C4H low borderline
Lusiscaffold570324460.1 Rosmarinic Acid C4H low borderline
Lusiscaffold60331700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold60332210.1 Rosmarinic Acid C4H medium pass
Lusiscaffold60332220.1 Rosmarinic Acid C4H medium pass
Lusiscaffold6040332900.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6050333960.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6050335480.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6050335490.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6050335510.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6050335700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold610336120.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6170340400.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6300344060.1 Rosmarinic Acid C4H medium pass
Lusiscaffold6410346700.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6410346730.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6410346760.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6410346770.1 Rosmarinic Acid C4H low borderline
Lusiscaffold660350480.1 Rosmarinic Acid C4H low borderline
Lusiscaffold670353770.1 Rosmarinic Acid C4H low borderline
Lusiscaffold670353780.1 Rosmarinic Acid C4H low borderline
Lusiscaffold670353890.1 Rosmarinic Acid C4H low borderline
Lusiscaffold670355250.1 Rosmarinic Acid C4H low borderline
Lusiscaffold670355520.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6740357060.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6800357610.1 Rosmarinic Acid C4H low borderline
Lusiscaffold6870358210.1 Rosmarinic Acid C4H medium pass
Lusiscaffold6890360000.1 Rosmarinic Acid C4H low borderline
Lusiscaffold7010361210.1 Rosmarinic Acid C4H low borderline
Lusiscaffold7010361230.1 Rosmarinic Acid C4H medium pass
Lusiscaffold7010361540.1 Rosmarinic Acid C4H low borderline
Lusiscaffold7010361630.1 Rosmarinic Acid C4H medium pass
Lusiscaffold7010362320.1 Rosmarinic Acid C4H low borderline
Lusiscaffold7010362330.1 Rosmarinic Acid C4H low borderline
Lusiscaffold7110364610.1 Rosmarinic Acid C4H medium pass
Lusiscaffold7110364630.1 Rosmarinic Acid C4H medium pass
Lusiscaffold7110364640.1 Rosmarinic Acid C4H low borderline