PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold610335990.1 Alkaloid BBE medium borderline
Lusiscaffold7010361150.1 Alkaloid BBE medium borderline
Lusiscaffold7110364720.1 Alkaloid BBE medium borderline
Lusiscaffold7340368780.1 Alkaloid BBE medium borderline
Lusiscaffold760376460.1 Alkaloid BBE medium borderline
Lusiscaffold8830406660.1 Alkaloid BBE medium borderline
Lusiscaffold8980409350.1 Alkaloid BBE medium borderline
Lusiscaffold980432240.1 Alkaloid BBE medium borderline
Lusiscaffold980432260.1 Alkaloid BBE medium borderline
Lusiscaffold980432280.1 Alkaloid BBE medium borderline
Lusiscaffold980432290.1 Alkaloid BBE medium borderline
Lusiscaffold980432300.1 Alkaloid BBE medium borderline
Lusiscaffold980432310.1 Alkaloid BBE medium borderline
Lusiscaffold980432320.1 Alkaloid BBE medium borderline
Lusiscaffold980432360.1 Alkaloid BBE medium borderline
Lusiscaffold980432370.1 Alkaloid BBE medium borderline
Lusiscaffold980432380.1 Alkaloid BBE medium borderline
Lusiscaffold980432390.1 Alkaloid BBE medium borderline
Lusiscaffold11990029050.1 Alkaloid CNMT low borderline
Lusiscaffold12020031630.1 Alkaloid CNMT low borderline
Lusiscaffold1230037540.1 Alkaloid CNMT low borderline
Lusiscaffold15580076800.1 Alkaloid CNMT low borderline
Lusiscaffold16860092730.1 Alkaloid CNMT low borderline
Lusiscaffold2010115140.1 Alkaloid CNMT low borderline
Lusiscaffold2310136870.1 Alkaloid CNMT medium borderline
Lusiscaffold250144960.1 Alkaloid CNMT low borderline
Lusiscaffold2720161770.1 Alkaloid CNMT low borderline
Lusiscaffold310201330.1 Alkaloid CNMT low borderline
Lusiscaffold370242360.1 Alkaloid CNMT low borderline
Lusiscaffold4260269460.1 Alkaloid CNMT low borderline
Lusiscaffold590329540.1 Alkaloid CNMT medium borderline
Lusiscaffold7010361110.1 Alkaloid CNMT low borderline
Lusiscaffold7010361760.1 Alkaloid CNMT low borderline
Lusiscaffold7110364770.1 Alkaloid CNMT low borderline
Lusiscaffold7650377490.1 Alkaloid CNMT low borderline
Lusiscaffold1030006430.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold1030006440.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold10350006680.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold10720012520.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold110015030.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold11430021620.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold11700026920.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold11700026940.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold11700026950.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold120029850.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold12160033370.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold1220034550.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold1230040410.1 Alkaloid CODM/T6ODM low borderline
Lusiscaffold1230040500.1 Alkaloid CODM/T6ODM medium borderline
Lusiscaffold1330051600.1 Alkaloid CODM/T6ODM medium borderline