PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold390255520.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4060256470.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4160259510.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold420265700.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold430271700.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold440275500.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4610281630.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4610281690.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4620283470.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4640287690.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4640288400.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4680290660.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4730293950.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4730293970.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4730293980.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4730293990.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold4750297110.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold5150310780.1 Steroid DWF4/CYP90B1 medium borderline
Lusiscaffold5400315220.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold5400315370.1 Steroid DWF4/CYP90B1 medium borderline
Lusiscaffold5400315380.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold5840327290.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold5840327300.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold60331700.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold6050334020.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold6050334030.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold6050335700.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold6410346700.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold670353770.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold670353780.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold670355250.1 Steroid DWF4/CYP90B1 medium borderline
Lusiscaffold670355700.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold6740357060.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold6870358210.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold7010361540.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold7110364640.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold760374060.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold760375780.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold7650377250.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold7650378270.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold7830382240.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold7830384160.1 Steroid DWF4/CYP90B1 medium borderline
Lusiscaffold820390070.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold860397900.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold8980408220.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold8980408230.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold90410700.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold90410730.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold9060415090.1 Steroid DWF4/CYP90B1 low borderline
Lusiscaffold9060415110.1 Steroid DWF4/CYP90B1 low borderline