PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Pcabscaffold_8781048790.1 Flavonoid 4CL medium pass
Pcabscaffold_9101066470.1 Flavonoid 4CL low borderline
Pcabscaffold_921072060.1 Flavonoid 4CL low borderline
Pcabscaffold_931077750.1 Flavonoid 4CL medium pass
Pcabscaffold_9321079750.1 Flavonoid 4CL medium pass
Pcabscaffold_9401083490.1 Flavonoid 4CL medium pass
Pcabscaffold_981099580.1 Flavonoid 4CL medium pass
Pcabscaffold_1030025060.1 Flavonoid ANR low borderline
Pcabscaffold_10410028260.1 Flavonoid ANR low borderline
Pcabscaffold_10850047360.1 Flavonoid ANR medium pass
Pcabscaffold_10850047370.1 Flavonoid ANR low borderline
Pcabscaffold_10900048800.1 Flavonoid ANR medium borderline
Pcabscaffold_11120058640.1 Flavonoid ANR medium borderline
Pcabscaffold_11240061830.1 Flavonoid ANR medium pass
Pcabscaffold_122_1075706-18185570103530.1 Flavonoid ANR medium borderline
Pcabscaffold_122_1075706-18185570103540.1 Flavonoid ANR medium borderline
Pcabscaffold_122_1075706-18185570103580.1 Flavonoid ANR medium borderline
Pcabscaffold_13540157620.1 Flavonoid ANR medium borderline
Pcabscaffold_13540157630.1 Flavonoid ANR medium borderline
Pcabscaffold_1390171700.1 Flavonoid ANR medium pass
Pcabscaffold_1420187110.1 Flavonoid ANR medium borderline
Pcabscaffold_1430189950.1 Flavonoid ANR medium borderline
Pcabscaffold_14800212560.1 Flavonoid ANR medium borderline
Pcabscaffold_1480210490.1 Flavonoid ANR medium borderline
Pcabscaffold_1480210520.1 Flavonoid ANR medium borderline
Pcabscaffold_1517_1-944650228820.1 Flavonoid ANR low borderline
Pcabscaffold_1517_1-944650228830.1 Flavonoid ANR low borderline
Pcabscaffold_15200229900.1 Flavonoid ANR medium borderline
Pcabscaffold_15200229910.1 Flavonoid ANR medium borderline
Pcabscaffold_18000321640.1 Flavonoid ANR medium borderline
Pcabscaffold_18000321650.1 Flavonoid ANR medium borderline
Pcabscaffold_18130324740.1 Flavonoid ANR medium borderline
Pcabscaffold_19510363190.1 Flavonoid ANR medium borderline
Pcabscaffold_19630365110.1 Flavonoid ANR medium borderline
Pcabscaffold_20383110.1 Flavonoid ANR medium borderline
Pcabscaffold_2040402740.1 Flavonoid ANR medium pass
Pcabscaffold_20440403480.1 Flavonoid ANR low borderline
Pcabscaffold_2160430160.1 Flavonoid ANR medium borderline
Pcabscaffold_2190436680.1 Flavonoid ANR low borderline
Pcabscaffold_2290458370.1 Flavonoid ANR low borderline
Pcabscaffold_230464590.1 Flavonoid ANR low borderline
Pcabscaffold_25140501750.1 Flavonoid ANR low borderline
Pcabscaffold_2560508390.1 Flavonoid ANR low borderline
Pcabscaffold_2670531250.1 Flavonoid ANR low borderline
Pcabscaffold_2680534740.1 Flavonoid ANR low borderline
Pcabscaffold_27600550650.1 Flavonoid ANR low borderline
Pcabscaffold_29740580180.1 Flavonoid ANR medium borderline
Pcabscaffold_2990582290.1 Flavonoid ANR medium borderline
Pcabscaffold_2990582300.1 Flavonoid ANR medium borderline
Pcabscaffold_2990582310.1 Flavonoid ANR medium borderline