PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Pcabscaffold_2990582320.1 Flavonoid ANR medium borderline
Pcabscaffold_2990582520.1 Flavonoid ANR low borderline
Pcabscaffold_29_1-33670660584010.1 Flavonoid ANR low borderline
Pcabscaffold_3190611490.1 Flavonoid ANR medium borderline
Pcabscaffold_3190611510.1 Flavonoid ANR medium borderline
Pcabscaffold_326830621970.1 Flavonoid ANR high pass
Pcabscaffold_33130629800.1 Flavonoid ANR medium borderline
Pcabscaffold_33130629810.1 Flavonoid ANR medium borderline
Pcabscaffold_3380637630.1 Flavonoid ANR medium borderline
Pcabscaffold_40_644123-29686580725020.1 Flavonoid ANR medium borderline
Pcabscaffold_429_1-8336930739470.1 Flavonoid ANR medium borderline
Pcabscaffold_4_900905-60197250804540.1 Flavonoid ANR low borderline
Pcabscaffold_5020813680.1 Flavonoid ANR low borderline
Pcabscaffold_530831910.1 Flavonoid ANR medium borderline
Pcabscaffold_5490847030.1 Flavonoid ANR low borderline
Pcabscaffold_5680856940.1 Flavonoid ANR low borderline
Pcabscaffold_58980874250.1 Flavonoid ANR medium borderline
Pcabscaffold_58980874260.1 Flavonoid ANR low borderline
Pcabscaffold_640910810.1 Flavonoid ANR medium borderline
Pcabscaffold_640910820.1 Flavonoid ANR medium borderline
Pcabscaffold_690939430.1 Flavonoid ANR medium borderline
Pcabscaffold_7750986870.1 Flavonoid ANR medium borderline
Pcabscaffold_7750986880.1 Flavonoid ANR medium borderline
Pcabscaffold_780989540.1 Flavonoid ANR medium borderline
Pcabscaffold_780989560.1 Flavonoid ANR medium borderline
Pcabscaffold_780989580.1 Flavonoid ANR medium borderline
Pcabscaffold_8921056680.1 Flavonoid ANR medium borderline
Pcabscaffold_8921056690.1 Flavonoid ANR medium borderline
Pcabscaffold_9341080460.1 Flavonoid ANR medium borderline
Pcabscaffold_941081890.1 Flavonoid ANR low borderline
Pcabscaffold_9_15686-49974061108170.1 Flavonoid ANR medium borderline
Pcabscaffold_11150059400.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_118_1-11863150086260.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_130136250.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_1360161890.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_1370164700.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_14670204560.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_15130227500.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_18020322220.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_18780340730.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_211_847-14465410421730.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_2560507440.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_25_430986-37583860515870.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_26760532030.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_27270544210.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_28700563720.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_360661350.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_3_2646351-60804880710300.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_3_2646351-60804880710930.1 Flavonoid ANS/LDOX medium pass
Pcabscaffold_3_2646351-60804880714130.1 Flavonoid ANS/LDOX medium borderline