PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Pcabscaffold_40_644123-29686580725420.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_410725880.1 Flavonoid ANS/LDOX medium pass
Pcabscaffold_4170731170.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_42380736300.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_42900739320.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_4800787050.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_51250821710.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_5340837180.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_5430844220.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_6270901430.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_710949490.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_7630978120.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_7760987200.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_7900995690.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_790994260.1 Flavonoid ANS/LDOX medium pass
Pcabscaffold_81003510.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_861039170.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_861039190.1 Flavonoid ANS/LDOX low borderline
Pcabscaffold_861039260.1 Flavonoid ANS/LDOX medium borderline
Pcabscaffold_10530032450.1 Flavonoid C4H medium borderline
Pcabscaffold_1070041570.1 Flavonoid C4H medium pass
Pcabscaffold_10990050870.1 Flavonoid C4H medium borderline
Pcabscaffold_1190088290.1 Flavonoid C4H medium borderline
Pcabscaffold_12300103640.1 Flavonoid C4H medium pass
Pcabscaffold_12580115000.1 Flavonoid C4H medium borderline
Pcabscaffold_12580115010.1 Flavonoid C4H low borderline
Pcabscaffold_13030139950.1 Flavonoid C4H medium borderline
Pcabscaffold_13480153790.1 Flavonoid C4H medium borderline
Pcabscaffold_1440193990.1 Flavonoid C4H low borderline
Pcabscaffold_1440194010.1 Flavonoid C4H medium borderline
Pcabscaffold_1440195310.1 Flavonoid C4H medium borderline
Pcabscaffold_15030223320.1 Flavonoid C4H medium pass
Pcabscaffold_16650277810.1 Flavonoid C4H low borderline
Pcabscaffold_1700288920.1 Flavonoid C4H medium borderline
Pcabscaffold_1780310730.1 Flavonoid C4H medium borderline
Pcabscaffold_19700366870.1 Flavonoid C4H low borderline
Pcabscaffold_209_1-7693100414650.1 Flavonoid C4H medium pass
Pcabscaffold_21340424530.1 Flavonoid C4H medium borderline
Pcabscaffold_213_1-10435660425670.1 Flavonoid C4H low borderline
Pcabscaffold_21630431120.1 Flavonoid C4H low borderline
Pcabscaffold_2220444480.1 Flavonoid C4H medium pass
Pcabscaffold_2240448550.1 Flavonoid C4H medium borderline
Pcabscaffold_230463900.1 Flavonoid C4H low borderline
Pcabscaffold_2870563330.1 Flavonoid C4H medium borderline
Pcabscaffold_30510593930.1 Flavonoid C4H medium borderline
Pcabscaffold_30910597620.1 Flavonoid C4H low borderline
Pcabscaffold_33_1-27880680639980.1 Flavonoid C4H medium borderline
Pcabscaffold_3570658130.1 Flavonoid C4H low borderline
Pcabscaffold_3570658180.1 Flavonoid C4H low borderline
Pcabscaffold_365800668620.1 Flavonoid C4H low borderline