PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_20480404020.1 Alkaloid GS low borderline
Pcabscaffold_20980413720.1 Alkaloid GS low borderline
Pcabscaffold_21580429680.1 Alkaloid GS high pass
Pcabscaffold_22590452540.1 Alkaloid GS high pass
Pcabscaffold_22590452610.1 Alkaloid GS high pass
Pcabscaffold_2290458180.1 Alkaloid GS low borderline
Pcabscaffold_2300465760.1 Alkaloid GS medium pass
Pcabscaffold_23300471740.1 Alkaloid GS high pass
Pcabscaffold_23560475130.1 Alkaloid GS low borderline
Pcabscaffold_24160488720.1 Alkaloid GS medium pass
Pcabscaffold_24570493600.1 Alkaloid GS low borderline
Pcabscaffold_25530506930.1 Alkaloid GS high pass
Pcabscaffold_2640526500.1 Alkaloid GS low borderline
Pcabscaffold_2710541950.1 Alkaloid GS low borderline
Pcabscaffold_2740546530.1 Alkaloid GS medium pass
Pcabscaffold_28490561160.1 Alkaloid GS low borderline
Pcabscaffold_2850561490.1 Alkaloid GS medium pass
Pcabscaffold_29050572640.1 Alkaloid GS high pass
Pcabscaffold_293_1-9211010576360.1 Alkaloid GS low borderline
Pcabscaffold_3170608880.1 Alkaloid GS high pass
Pcabscaffold_3170608940.1 Alkaloid GS high pass
Pcabscaffold_3240619000.1 Alkaloid GS low borderline
Pcabscaffold_33810637810.1 Alkaloid GS low borderline
Pcabscaffold_340641310.1 Alkaloid GS high pass
Pcabscaffold_34720648420.1 Alkaloid GS medium pass
Pcabscaffold_34970650340.1 Alkaloid GS medium pass
Pcabscaffold_35210654610.1 Alkaloid GS low borderline
Pcabscaffold_3550656640.1 Alkaloid GS low borderline
Pcabscaffold_36790669460.1 Alkaloid GS low borderline
Pcabscaffold_3740676920.1 Alkaloid GS low borderline
Pcabscaffold_3840689650.1 Alkaloid GS low borderline
Pcabscaffold_3880693680.1 Alkaloid GS high pass
Pcabscaffold_3_2646351-60804880713150.1 Alkaloid GS low borderline
Pcabscaffold_4050719050.1 Alkaloid GS medium pass
Pcabscaffold_4070721120.1 Alkaloid GS high pass
Pcabscaffold_4550761170.1 Alkaloid GS high pass
Pcabscaffold_4570762140.1 Alkaloid GS high pass
Pcabscaffold_4770781200.1 Alkaloid GS medium pass
Pcabscaffold_47850782200.1 Alkaloid GS medium pass
Pcabscaffold_4940796330.1 Alkaloid GS low borderline
Pcabscaffold_500810980.1 Alkaloid GS low borderline
Pcabscaffold_50808460.1 Alkaloid GS medium pass
Pcabscaffold_5190824910.1 Alkaloid GS low borderline
Pcabscaffold_547_1-8148510845670.1 Alkaloid GS low borderline
Pcabscaffold_5640855630.1 Alkaloid GS medium pass
Pcabscaffold_5900874880.1 Alkaloid GS medium pass
Pcabscaffold_60878570.1 Alkaloid GS low borderline
Pcabscaffold_60879640.1 Alkaloid GS low borderline
Pcabscaffold_60880080.1 Alkaloid GS high pass
Pcabscaffold_60880090.1 Alkaloid GS high pass