PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_60880500.1 Alkaloid GS low borderline
Pcabscaffold_60880890.1 Alkaloid GS high pass
Pcabscaffold_6100892360.1 Alkaloid GS low borderline
Pcabscaffold_620898700.1 Alkaloid GS high pass
Pcabscaffold_620898730.1 Alkaloid GS high pass
Pcabscaffold_6320906500.1 Alkaloid GS medium pass
Pcabscaffold_650916310.1 Alkaloid GS low borderline
Pcabscaffold_6610924580.1 Alkaloid GS high pass
Pcabscaffold_6750930820.1 Alkaloid GS low borderline
Pcabscaffold_6840935320.1 Alkaloid GS high pass
Pcabscaffold_7120952590.1 Alkaloid GS high pass
Pcabscaffold_730962200.1 Alkaloid GS low borderline
Pcabscaffold_730962210.1 Alkaloid GS low borderline
Pcabscaffold_7580976780.1 Alkaloid GS high pass
Pcabscaffold_7600977570.1 Alkaloid GS low borderline
Pcabscaffold_811011980.1 Alkaloid GS high pass
Pcabscaffold_8111014740.1 Alkaloid GS low borderline
Pcabscaffold_8301024630.1 Alkaloid GS medium pass
Pcabscaffold_83601027090.1 Alkaloid GS low borderline
Pcabscaffold_8501032420.1 Alkaloid GS medium pass
Pcabscaffold_8611041200.1 Alkaloid GS medium pass
Pcabscaffold_871044910.1 Alkaloid GS high pass
Pcabscaffold_871044950.1 Alkaloid GS high pass
Pcabscaffold_8771048370.1 Alkaloid GS low borderline
Pcabscaffold_88_311528-23538291053770.1 Alkaloid GS high pass
Pcabscaffold_9201072890.1 Alkaloid GS low borderline
Pcabscaffold_941082060.1 Alkaloid GS low borderline
Pcabscaffold_951086170.1 Alkaloid GS high pass
Pcabscaffold_951086450.1 Alkaloid GS high pass
Pcabscaffold_951086620.1 Alkaloid GS high pass
Pcabscaffold_971096040.1 Alkaloid GS high pass
Pcabscaffold_10240022540.1 Alkaloid H6H medium pass
Pcabscaffold_102680022790.1 Alkaloid H6H medium borderline
Pcabscaffold_10920049190.1 Alkaloid H6H low borderline
Pcabscaffold_10920049200.1 Alkaloid H6H low borderline
Pcabscaffold_11610077140.1 Alkaloid H6H low borderline
Pcabscaffold_11680079470.1 Alkaloid H6H low borderline
Pcabscaffold_1170080070.1 Alkaloid H6H low borderline
Pcabscaffold_1170080080.1 Alkaloid H6H low borderline
Pcabscaffold_12090096500.1 Alkaloid H6H low borderline
Pcabscaffold_122_1-10734620102820.1 Alkaloid H6H medium pass
Pcabscaffold_1250110330.1 Alkaloid H6H medium borderline
Pcabscaffold_12880126520.1 Alkaloid H6H medium borderline
Pcabscaffold_12_923860-48109350133100.1 Alkaloid H6H low borderline
Pcabscaffold_12_923860-48109350133110.1 Alkaloid H6H low borderline
Pcabscaffold_1350156500.1 Alkaloid H6H medium borderline
Pcabscaffold_14100182690.1 Alkaloid H6H high pass
Pcabscaffold_1450200530.1 Alkaloid H6H medium borderline
Pcabscaffold_14590202500.1 Alkaloid H6H medium borderline
Pcabscaffold_147_1-13211470209370.1 Alkaloid H6H low borderline