PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_1560242940.1 Alkaloid IO medium borderline
Pcabscaffold_1600259200.1 Alkaloid IO low borderline
Pcabscaffold_161_179220-17084620265560.1 Alkaloid IO medium borderline
Pcabscaffold_16460273460.1 Alkaloid IO medium borderline
Pcabscaffold_1660276590.1 Alkaloid IO medium borderline
Pcabscaffold_16650277800.1 Alkaloid IO medium borderline
Pcabscaffold_16650277810.1 Alkaloid IO medium borderline
Pcabscaffold_16860285080.1 Alkaloid IO medium borderline
Pcabscaffold_16950286590.1 Alkaloid IO medium borderline
Pcabscaffold_16950286600.1 Alkaloid IO medium borderline
Pcabscaffold_169_1-5014340287950.1 Alkaloid IO medium borderline
Pcabscaffold_1700288920.1 Alkaloid IO medium borderline
Pcabscaffold_17620304670.1 Alkaloid IO medium borderline
Pcabscaffold_1810323750.1 Alkaloid IO medium borderline
Pcabscaffold_18470332420.1 Alkaloid IO low borderline
Pcabscaffold_1970366470.1 Alkaloid IO low borderline
Pcabscaffold_1970366700.1 Alkaloid IO low borderline
Pcabscaffold_1980369200.1 Alkaloid IO medium borderline
Pcabscaffold_1980369210.1 Alkaloid IO low borderline
Pcabscaffold_1980369220.1 Alkaloid IO high pass
Pcabscaffold_2000393620.1 Alkaloid IO medium borderline
Pcabscaffold_20450403620.1 Alkaloid IO medium borderline
Pcabscaffold_20490404180.1 Alkaloid IO medium borderline
Pcabscaffold_213_1-10435660425640.1 Alkaloid IO low borderline
Pcabscaffold_213_1048694-11545650425720.1 Alkaloid IO low borderline
Pcabscaffold_2140426310.1 Alkaloid IO medium borderline
Pcabscaffold_2140426330.1 Alkaloid IO medium borderline
Pcabscaffold_22070440890.1 Alkaloid IO low borderline
Pcabscaffold_220_1-13634480442130.1 Alkaloid IO low borderline
Pcabscaffold_22150443680.1 Alkaloid IO medium borderline
Pcabscaffold_22180444060.1 Alkaloid IO low borderline
Pcabscaffold_22860457730.1 Alkaloid IO medium borderline
Pcabscaffold_230463900.1 Alkaloid IO medium borderline
Pcabscaffold_240482520.1 Alkaloid IO medium borderline
Pcabscaffold_240484400.1 Alkaloid IO medium borderline
Pcabscaffold_24410492290.1 Alkaloid IO low borderline
Pcabscaffold_2480496460.1 Alkaloid IO low borderline
Pcabscaffold_2480496620.1 Alkaloid IO low borderline
Pcabscaffold_25360504310.1 Alkaloid IO medium borderline
Pcabscaffold_25360504320.1 Alkaloid IO medium borderline
Pcabscaffold_25360504330.1 Alkaloid IO medium borderline
Pcabscaffold_25_430986-37583860514920.1 Alkaloid IO medium borderline
Pcabscaffold_2650527970.1 Alkaloid IO medium borderline
Pcabscaffold_26780532080.1 Alkaloid IO medium borderline
Pcabscaffold_2700540940.1 Alkaloid IO medium borderline
Pcabscaffold_27040541400.1 Alkaloid IO medium pass
Pcabscaffold_270540260.1 Alkaloid IO medium borderline
Pcabscaffold_27180542990.1 Alkaloid IO low borderline
Pcabscaffold_27180543010.1 Alkaloid IO low borderline
Pcabscaffold_2730544780.1 Alkaloid IO medium borderline