PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_2840559720.1 Alkaloid IO medium borderline
Pcabscaffold_291510574650.1 Alkaloid IO low borderline
Pcabscaffold_29_1-33670660583580.1 Alkaloid IO low borderline
Pcabscaffold_32380618760.1 Alkaloid IO medium borderline
Pcabscaffold_32380618770.1 Alkaloid IO medium borderline
Pcabscaffold_32430619480.1 Alkaloid IO medium borderline
Pcabscaffold_3260621430.1 Alkaloid IO medium borderline
Pcabscaffold_34510646670.1 Alkaloid IO low borderline
Pcabscaffold_3490650060.1 Alkaloid IO medium borderline
Pcabscaffold_350650920.1 Alkaloid IO low borderline
Pcabscaffold_350650970.1 Alkaloid IO medium borderline
Pcabscaffold_3510652930.1 Alkaloid IO low borderline
Pcabscaffold_3540656050.1 Alkaloid IO low borderline
Pcabscaffold_3550656650.1 Alkaloid IO medium borderline
Pcabscaffold_3550656690.1 Alkaloid IO medium borderline
Pcabscaffold_3660668670.1 Alkaloid IO medium borderline
Pcabscaffold_37100674690.1 Alkaloid IO medium borderline
Pcabscaffold_3720675590.1 Alkaloid IO medium borderline
Pcabscaffold_381_1-3498320687440.1 Alkaloid IO medium borderline
Pcabscaffold_381_1-3498320687450.1 Alkaloid IO medium borderline
Pcabscaffold_381_1-3498320687460.1 Alkaloid IO medium borderline
Pcabscaffold_383_1-10745670688920.1 Alkaloid IO medium borderline
Pcabscaffold_3_1-26455000709200.1 Alkaloid IO medium borderline
Pcabscaffold_40850722790.1 Alkaloid IO medium borderline
Pcabscaffold_42370736230.1 Alkaloid IO medium borderline
Pcabscaffold_42780738540.1 Alkaloid IO medium borderline
Pcabscaffold_470775560.1 Alkaloid IO medium borderline
Pcabscaffold_4710777160.1 Alkaloid IO low borderline
Pcabscaffold_4740778980.1 Alkaloid IO medium borderline
Pcabscaffold_4990797490.1 Alkaloid IO medium borderline
Pcabscaffold_4_900905-60197250805310.1 Alkaloid IO medium borderline
Pcabscaffold_500809830.1 Alkaloid IO medium borderline
Pcabscaffold_500811970.1 Alkaloid IO medium borderline
Pcabscaffold_5070816590.1 Alkaloid IO medium borderline
Pcabscaffold_5380838300.1 Alkaloid IO medium borderline
Pcabscaffold_5570852330.1 Alkaloid IO medium borderline
Pcabscaffold_5570852340.1 Alkaloid IO medium borderline
Pcabscaffold_5570852350.1 Alkaloid IO medium borderline
Pcabscaffold_5570852360.1 Alkaloid IO medium borderline
Pcabscaffold_5570852370.1 Alkaloid IO medium borderline
Pcabscaffold_5630855230.1 Alkaloid IO medium borderline
Pcabscaffold_5630855240.1 Alkaloid IO medium borderline
Pcabscaffold_5630855250.1 Alkaloid IO medium borderline
Pcabscaffold_5630855260.1 Alkaloid IO medium borderline
Pcabscaffold_5630855270.1 Alkaloid IO medium borderline
Pcabscaffold_5640855500.1 Alkaloid IO medium borderline
Pcabscaffold_5640855580.1 Alkaloid IO medium borderline
Pcabscaffold_5640855590.1 Alkaloid IO medium borderline
Pcabscaffold_576_58064-6507780866730.1 Alkaloid IO medium borderline
Pcabscaffold_6110893200.1 Alkaloid IO medium borderline