PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
FexcContig10260005120.1 Alkaloid BBE low borderline
FexcContig14920048530.1 Alkaloid BBE medium borderline
FexcContig153890051940.1 Alkaloid BBE medium borderline
FexcContig16250058850.1 Alkaloid BBE medium borderline
FexcContig16250058860.1 Alkaloid BBE medium borderline
FexcContig18100073540.1 Alkaloid BBE medium borderline
FexcContig18100073560.1 Alkaloid BBE medium borderline
FexcContig198660087330.1 Alkaloid BBE medium borderline
FexcContig19940087890.1 Alkaloid BBE medium borderline
FexcContig27070139150.1 Alkaloid BBE medium borderline
FexcContig28180146650.1 Alkaloid BBE medium borderline
FexcContig28180146660.1 Alkaloid BBE medium borderline
FexcContig30157890.1 Alkaloid BBE medium borderline
FexcContig31370165210.1 Alkaloid BBE medium borderline
FexcContig34070180110.1 Alkaloid BBE medium borderline
FexcContig34070180120.1 Alkaloid BBE medium borderline
FexcContig37880200080.1 Alkaloid BBE medium borderline
FexcContig40090211400.1 Alkaloid BBE medium borderline
FexcContig40350212700.1 Alkaloid BBE medium borderline
FexcContig42210221570.1 Alkaloid BBE medium borderline
FexcContig45230233380.1 Alkaloid BBE medium borderline
FexcContig50170252350.1 Alkaloid BBE medium borderline
FexcContig51000255090.1 Alkaloid BBE medium borderline
FexcContig53620265140.1 Alkaloid BBE medium borderline
FexcContig57460280940.1 Alkaloid BBE medium borderline
FexcContig6250298900.1 Alkaloid BBE medium borderline
FexcContig63100301060.1 Alkaloid BBE medium borderline
FexcContig650750306620.1 Alkaloid BBE medium borderline
FexcContig65860308420.1 Alkaloid BBE medium borderline
FexcContig68110314290.1 Alkaloid BBE medium borderline
FexcContig68950316680.1 Alkaloid BBE medium borderline
FexcContig68950316690.1 Alkaloid BBE medium borderline
FexcContig71780323980.1 Alkaloid BBE medium borderline
FexcContig7400329190.1 Alkaloid BBE medium borderline
FexcContig7400329200.1 Alkaloid BBE medium borderline
FexcContig7400329210.1 Alkaloid BBE medium borderline
FexcContig81160347180.1 Alkaloid BBE medium borderline
FexcContig849520356150.1 Alkaloid BBE medium borderline
FexcContig90368940.1 Alkaloid BBE medium borderline
FexcContig90368950.1 Alkaloid BBE medium borderline
FexcContig90368960.1 Alkaloid BBE low borderline