PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
FexcContig100000950.1 Flavonoid UFGT medium pass
FexcContig100000960.1 Flavonoid UFGT low borderline
FexcContig10070002270.1 Flavonoid UFGT high pass
FexcContig101120002930.1 Flavonoid UFGT high pass
FexcContig101120002940.1 Flavonoid UFGT low borderline
FexcContig101450003360.1 Flavonoid UFGT medium pass
FexcContig11210015510.1 Flavonoid UFGT medium pass
FexcContig120022500.1 Flavonoid UFGT medium pass
FexcContig13090032140.1 Flavonoid UFGT low borderline
FexcContig131000032420.1 Flavonoid UFGT high pass
FexcContig13680038380.1 Flavonoid UFGT medium pass
FexcContig13980041090.1 Flavonoid UFGT medium pass
FexcContig14170042640.1 Flavonoid UFGT medium pass
FexcContig14170042640.2 Flavonoid UFGT medium pass
FexcContig14170042660.1 Flavonoid UFGT high pass
FexcContig1420042940.1 Flavonoid UFGT medium pass
FexcContig1420042950.1 Flavonoid UFGT medium pass
FexcContig1420042970.1 Flavonoid UFGT high pass
FexcContig14300043780.1 Flavonoid UFGT high pass
FexcContig14600046140.2 Flavonoid UFGT medium pass
FexcContig14600046150.1 Flavonoid UFGT medium pass
FexcContig14600046150.2 Flavonoid UFGT medium pass
FexcContig1470046850.1 Flavonoid UFGT high pass
FexcContig1470046860.1 Flavonoid UFGT medium pass
FexcContig1470046860.2 Flavonoid UFGT high pass
FexcContig15650054410.1 Flavonoid UFGT medium pass
FexcContig161410058170.1 Flavonoid UFGT low borderline
FexcContig16750062660.1 Flavonoid UFGT medium pass
FexcContig16790063160.1 Flavonoid UFGT high pass
FexcContig173960067920.1 Flavonoid UFGT medium pass
FexcContig17560069070.1 Flavonoid UFGT medium pass
FexcContig1770070150.1 Flavonoid UFGT medium pass
FexcContig1770070160.1 Flavonoid UFGT high pass
FexcContig1770070160.2 Flavonoid UFGT high pass
FexcContig1790071650.1 Flavonoid UFGT high pass
FexcContig1790071660.1 Flavonoid UFGT high pass
FexcContig1790071670.1 Flavonoid UFGT high pass
FexcContig17990072440.1 Flavonoid UFGT high pass
FexcContig17990072450.1 Flavonoid UFGT high pass
FexcContig17990072460.1 Flavonoid UFGT high pass
FexcContig1800072660.1 Flavonoid UFGT medium pass
FexcContig1800072670.1 Flavonoid UFGT medium pass
FexcContig18430076290.1 Flavonoid UFGT high pass
FexcContig1860077430.1 Flavonoid UFGT medium pass
FexcContig1920082740.1 Flavonoid UFGT medium pass
FexcContig1960085380.1 Flavonoid UFGT medium pass
FexcContig19610085450.1 Flavonoid UFGT low borderline
FexcContig19610085470.1 Flavonoid UFGT high pass
FexcContig19610085470.2 Flavonoid UFGT high pass
FexcContig19610085480.1 Flavonoid UFGT medium pass