PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
FexcContig1160019120.1 Alkaloid TRI/TRII medium pass
FexcContig11750020640.1 Alkaloid TRI/TRII medium pass
FexcContig11750020650.1 Alkaloid TRI/TRII medium pass
FexcContig16230058770.1 Alkaloid TRI/TRII medium pass
FexcContig1640059960.1 Alkaloid TRI/TRII medium pass
FexcContig16570061400.1 Alkaloid TRI/TRII medium pass
FexcContig17360067750.1 Alkaloid TRI/TRII medium pass
FexcContig19190082710.1 Alkaloid TRI/TRII medium pass
FexcContig19190082710.2 Alkaloid TRI/TRII medium pass
FexcContig19190082710.3 Alkaloid TRI/TRII medium pass
FexcContig20450092750.1 Alkaloid TRI/TRII medium pass
FexcContig21120097450.1 Alkaloid TRI/TRII medium pass
FexcContig22180105150.1 Alkaloid TRI/TRII medium pass
FexcContig22180105160.1 Alkaloid TRI/TRII medium pass
FexcContig22180105170.1 Alkaloid TRI/TRII medium pass
FexcContig22770109110.1 Alkaloid TRI/TRII medium pass
FexcContig22770109120.1 Alkaloid TRI/TRII medium pass
FexcContig22770109130.1 Alkaloid TRI/TRII medium pass
FexcContig22770109140.1 Alkaloid TRI/TRII medium pass
FexcContig22940110170.1 Alkaloid TRI/TRII medium pass
FexcContig2320112390.1 Alkaloid TRI/TRII medium pass
FexcContig2430119970.1 Alkaloid TRI/TRII medium pass
FexcContig2430119970.2 Alkaloid TRI/TRII medium pass
FexcContig24350120360.1 Alkaloid TRI/TRII medium pass
FexcContig246420122720.1 Alkaloid TRI/TRII medium pass
FexcContig25010125270.1 Alkaloid TRI/TRII medium pass
FexcContig2590132220.1 Alkaloid TRI/TRII medium pass
FexcContig28150146490.1 Alkaloid TRI/TRII medium pass
FexcContig2860149210.1 Alkaloid TRI/TRII medium pass
FexcContig31270164710.1 Alkaloid TRI/TRII medium pass
FexcContig31750167100.1 Alkaloid TRI/TRII medium pass
FexcContig31750167110.1 Alkaloid TRI/TRII medium pass
FexcContig34090180250.1 Alkaloid TRI/TRII low borderline
FexcContig34250181330.1 Alkaloid TRI/TRII medium pass
FexcContig3580189660.1 Alkaloid TRI/TRII medium pass
FexcContig3580189740.1 Alkaloid TRI/TRII medium pass
FexcContig36310192310.1 Alkaloid TRI/TRII medium pass
FexcContig37280197590.1 Alkaloid TRI/TRII medium pass
FexcContig3860204250.1 Alkaloid TRI/TRII medium pass
FexcContig3970209270.1 Alkaloid TRI/TRII low borderline
FexcContig5070253940.1 Alkaloid TRI/TRII low borderline
FexcContig50870254510.1 Alkaloid TRI/TRII medium pass
FexcContig5100254970.1 Alkaloid TRI/TRII medium pass
FexcContig514930256670.1 Alkaloid TRI/TRII low borderline
FexcContig52570261770.1 Alkaloid TRI/TRII medium pass
FexcContig5830284430.1 Alkaloid TRI/TRII low borderline
FexcContig62880299880.1 Alkaloid TRI/TRII medium pass
FexcContig62880299880.2 Alkaloid TRI/TRII medium pass
FexcContig6880316240.1 Alkaloid TRI/TRII medium pass
FexcContig7040320760.1 Alkaloid TRI/TRII medium pass