PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
FexcContig1030005830.1 Flavonoid IFR high pass
FexcContig11110014570.1 Flavonoid IFR low borderline
FexcContig1260027820.1 Flavonoid IFR low borderline
FexcContig14030041780.1 Flavonoid IFR low borderline
FexcContig14030041780.2 Flavonoid IFR low borderline
FexcContig14030041780.3 Flavonoid IFR low borderline
FexcContig14170042630.1 Flavonoid IFR low borderline
FexcContig14170042630.2 Flavonoid IFR low borderline
FexcContig14300043750.1 Flavonoid IFR low borderline
FexcContig1470046880.1 Flavonoid IFR low borderline
FexcContig1470046880.2 Flavonoid IFR low borderline
FexcContig1470046880.3 Flavonoid IFR low borderline
FexcContig14910048480.1 Flavonoid IFR high pass
FexcContig14910048490.1 Flavonoid IFR high pass
FexcContig16570061470.1 Flavonoid IFR low borderline
FexcContig16830063370.1 Flavonoid IFR low borderline
FexcContig1750068710.1 Flavonoid IFR low borderline
FexcContig17660069740.1 Flavonoid IFR low borderline
FexcContig177630070700.1 Flavonoid IFR low borderline
FexcContig18670077970.1 Flavonoid IFR high pass
FexcContig18830079270.1 Flavonoid IFR low borderline
FexcContig18830079270.2 Flavonoid IFR low borderline
FexcContig20480093100.1 Flavonoid IFR high pass
FexcContig2220105420.1 Flavonoid IFR low borderline
FexcContig2260107980.1 Flavonoid IFR low borderline
FexcContig232720113100.1 Flavonoid IFR high pass
FexcContig23900117190.1 Flavonoid IFR low borderline
FexcContig24170119080.1 Flavonoid IFR high pass
FexcContig24300120050.1 Flavonoid IFR medium pass
FexcContig24300120050.2 Flavonoid IFR medium pass
FexcContig2430119810.1 Flavonoid IFR low borderline
FexcContig24420121030.1 Flavonoid IFR low borderline
FexcContig25060125490.1 Flavonoid IFR low borderline
FexcContig26030133090.1 Flavonoid IFR low borderline
FexcContig27500141790.1 Flavonoid IFR high pass
FexcContig27750143490.1 Flavonoid IFR medium pass
FexcContig29670155990.1 Flavonoid IFR low borderline
FexcContig31130163870.1 Flavonoid IFR high pass
FexcContig31130163880.1 Flavonoid IFR high pass
FexcContig3210169400.1 Flavonoid IFR low borderline
FexcContig3210169400.2 Flavonoid IFR low borderline
FexcContig323540171140.1 Flavonoid IFR low borderline
FexcContig3250172150.1 Flavonoid IFR low borderline
FexcContig3250172150.2 Flavonoid IFR low borderline
FexcContig32560172430.1 Flavonoid IFR high pass
FexcContig33190175830.1 Flavonoid IFR low borderline
FexcContig345410183120.1 Flavonoid IFR high pass
FexcContig37680199430.1 Flavonoid IFR low borderline
FexcContig3770199470.1 Flavonoid IFR high pass
FexcContig38070201390.1 Flavonoid IFR low borderline