PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
FexcContig10100002800.1 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig12340025680.1 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig12340025690.1 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig17590069160.1 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig200088430.1 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
FexcContig30710162040.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig30710162040.2 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig30710162050.1 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig4470230820.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig5500271070.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig5500271070.2 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig57280280380.1 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig10100002800.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig12340025680.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig12340025690.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig17590069160.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig200088430.1 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
FexcContig30710162040.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig30710162040.2 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig30710162050.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig4470230820.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig5500271070.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig5500271070.2 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig57280280380.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig10100002800.1 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig12340025680.1 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig12340025690.1 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig17590069160.1 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig200088430.1 Rosmarinic Acid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
FexcContig30710162040.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig30710162040.2 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig30710162050.1 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig4470230820.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig5500271070.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig5500271070.2 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
FexcContig57280280380.1 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR