PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
FexcContig10070002250.1 Rosmarinic Acid RAS low borderline
FexcContig10070002250.2 Rosmarinic Acid RAS low borderline
FexcContig11460017860.1 Rosmarinic Acid RAS low borderline
FexcContig12680028350.1 Rosmarinic Acid RAS low borderline
FexcContig12740028730.1 Rosmarinic Acid RAS medium pass
FexcContig12740028740.1 Rosmarinic Acid RAS medium pass
FexcContig1310032190.1 Rosmarinic Acid RAS low borderline
FexcContig14780047240.1 Rosmarinic Acid RAS medium pass
FexcContig147960047320.1 Rosmarinic Acid RAS medium pass
FexcContig15020049470.1 Rosmarinic Acid RAS low borderline
FexcContig15020049470.2 Rosmarinic Acid RAS low borderline
FexcContig1980086890.1 Rosmarinic Acid RAS low borderline
FexcContig1980086890.2 Rosmarinic Acid RAS low borderline
FexcContig23170112220.1 Rosmarinic Acid RAS low borderline
FexcContig23420114230.1 Rosmarinic Acid RAS low borderline
FexcContig23420114230.2 Rosmarinic Acid RAS low borderline
FexcContig23420114230.3 Rosmarinic Acid RAS low borderline
FexcContig24650122770.1 Rosmarinic Acid RAS low borderline
FexcContig24650122770.2 Rosmarinic Acid RAS low borderline
FexcContig24680122990.1 Rosmarinic Acid RAS low borderline
FexcContig24680122990.2 Rosmarinic Acid RAS low borderline
FexcContig2570130420.1 Rosmarinic Acid RAS low borderline
FexcContig27360140630.1 Rosmarinic Acid RAS medium pass
FexcContig27360140630.2 Rosmarinic Acid RAS medium pass
FexcContig28370147960.1 Rosmarinic Acid RAS low borderline
FexcContig29320154190.1 Rosmarinic Acid RAS medium pass
FexcContig29370154500.1 Rosmarinic Acid RAS medium pass
FexcContig2960155630.1 Rosmarinic Acid RAS low borderline
FexcContig29610155720.1 Rosmarinic Acid RAS low borderline
FexcContig29720156370.1 Rosmarinic Acid RAS low borderline
FexcContig352650186860.1 Rosmarinic Acid RAS medium pass
FexcContig37440198190.1 Rosmarinic Acid RAS medium pass
FexcContig38610204430.1 Rosmarinic Acid RAS low borderline
FexcContig4110215970.1 Rosmarinic Acid RAS low borderline
FexcContig4300224730.1 Rosmarinic Acid RAS low borderline
FexcContig46270237220.1 Rosmarinic Acid RAS medium pass
FexcContig48830246860.1 Rosmarinic Acid RAS low borderline
FexcContig48830246860.2 Rosmarinic Acid RAS low borderline
FexcContig56370277050.1 Rosmarinic Acid RAS low borderline
FexcContig588690286260.1 Rosmarinic Acid RAS medium pass
FexcContig6080294540.1 Rosmarinic Acid RAS low borderline
FexcContig6340301870.1 Rosmarinic Acid RAS low borderline
FexcContig6340301870.2 Rosmarinic Acid RAS low borderline
FexcContig70090319620.1 Rosmarinic Acid RAS low borderline
FexcContig724250325580.1 Rosmarinic Acid RAS low borderline
FexcContig724250325580.2 Rosmarinic Acid RAS low borderline
FexcContig800690344160.1 Rosmarinic Acid RAS medium pass
FexcContig96000381230.1 Rosmarinic Acid RAS medium pass
FexcContig96000381230.2 Rosmarinic Acid RAS medium pass
FexcContig9670382570.1 Rosmarinic Acid RAS medium pass