PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
FexcContig100350001650.1 Steroid CPD/CYP90A1 low borderline
FexcContig104730008340.1 Steroid CPD/CYP90A1 medium borderline
FexcContig104730008340.2 Steroid CPD/CYP90A1 medium borderline
FexcContig14850047620.1 Steroid CPD/CYP90A1 medium borderline
FexcContig16260058870.1 Steroid CPD/CYP90A1 low borderline
FexcContig16300059290.1 Steroid CPD/CYP90A1 medium borderline
FexcContig19500084700.1 Steroid CPD/CYP90A1 low borderline
FexcContig22040104620.1 Steroid CPD/CYP90A1 low borderline
FexcContig2230106030.1 Steroid CPD/CYP90A1 low borderline
FexcContig22520107510.1 Steroid CPD/CYP90A1 medium borderline
FexcContig2300110870.1 Steroid CPD/CYP90A1 low borderline
FexcContig23190112370.1 Steroid CPD/CYP90A1 low borderline
FexcContig26730136830.1 Steroid CPD/CYP90A1 low borderline
FexcContig29270153890.1 Steroid CPD/CYP90A1 medium borderline
FexcContig30460160800.1 Steroid CPD/CYP90A1 medium borderline
FexcContig33740178140.1 Steroid CPD/CYP90A1 low borderline
FexcContig453520233940.1 Steroid CPD/CYP90A1 medium borderline
FexcContig49640249870.1 Steroid CPD/CYP90A1 medium borderline
FexcContig50400253170.1 Steroid CPD/CYP90A1 medium borderline
FexcContig5220260030.1 Steroid CPD/CYP90A1 medium borderline
FexcContig52470261180.1 Steroid CPD/CYP90A1 low borderline
FexcContig52470261180.2 Steroid CPD/CYP90A1 low borderline
FexcContig5340264570.1 Steroid CPD/CYP90A1 low borderline
FexcContig6140296390.1 Steroid CPD/CYP90A1 low borderline
FexcContig61900297530.1 Steroid CPD/CYP90A1 low borderline
FexcContig61900297530.2 Steroid CPD/CYP90A1 low borderline
FexcContig652020306980.1 Steroid CPD/CYP90A1 low borderline
FexcContig700980319680.1 Steroid CPD/CYP90A1 medium borderline
FexcContig73910328770.1 Steroid CPD/CYP90A1 low borderline
FexcContig7640334990.1 Steroid CPD/CYP90A1 low borderline
FexcContig8940367620.1 Steroid CPD/CYP90A1 low borderline
FexcContig900369340.1 Steroid CPD/CYP90A1 medium borderline
FexcContig92480374380.1 Steroid CPD/CYP90A1 low borderline
FexcContig97270383590.1 Steroid CPD/CYP90A1 low borderline