PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
Reset
Gene Pathway Family Confidence Status
FexcContig12280025100.1 Alkaloid H6H low borderline
FexcContig15170050770.1 Alkaloid H6H medium pass
FexcContig15170050770.2 Alkaloid H6H medium pass
FexcContig15200050960.1 Alkaloid H6H medium borderline
FexcContig1530051680.1 Alkaloid H6H low borderline
FexcContig1560054060.1 Alkaloid H6H low borderline
FexcContig1560054060.2 Alkaloid H6H low borderline
FexcContig15860056120.1 Alkaloid H6H low borderline
FexcContig21100097360.1 Alkaloid H6H medium borderline
FexcContig21100097360.2 Alkaloid H6H medium borderline
FexcContig21650101180.1 Alkaloid H6H low borderline
FexcContig21690101250.1 Alkaloid H6H low borderline
FexcContig21970103850.1 Alkaloid H6H medium borderline
FexcContig21970103860.1 Alkaloid H6H medium borderline
FexcContig22520107480.1 Alkaloid H6H low borderline
FexcContig22520107480.2 Alkaloid H6H low borderline
FexcContig22720108850.1 Alkaloid H6H medium borderline
FexcContig22910110000.2 Alkaloid H6H low borderline
FexcContig23660115660.1 Alkaloid H6H medium borderline
FexcContig24200119350.1 Alkaloid H6H medium pass
FexcContig25070125500.1 Alkaloid H6H low borderline
FexcContig25650130080.1 Alkaloid H6H medium borderline
FexcContig25650130090.1 Alkaloid H6H medium borderline
FexcContig280145030.1 Alkaloid H6H low borderline
FexcContig2900152170.1 Alkaloid H6H low borderline
FexcContig30100159140.1 Alkaloid H6H medium borderline
FexcContig33400176650.1 Alkaloid H6H low borderline
FexcContig35390187710.1 Alkaloid H6H medium borderline
FexcContig35390187710.2 Alkaloid H6H medium borderline
FexcContig38060201260.1 Alkaloid H6H low borderline
FexcContig38060201260.2 Alkaloid H6H low borderline
FexcContig39310207740.1 Alkaloid H6H low borderline
FexcContig39370207910.1 Alkaloid H6H low borderline
FexcContig40360212730.1 Alkaloid H6H medium borderline
FexcContig40360212730.2 Alkaloid H6H medium borderline
FexcContig41060215720.1 Alkaloid H6H low borderline
FexcContig41060215730.1 Alkaloid H6H low borderline
FexcContig41060215730.2 Alkaloid H6H low borderline
FexcContig42680223090.1 Alkaloid H6H medium borderline
FexcContig44790231160.1 Alkaloid H6H low borderline
FexcContig4520233130.1 Alkaloid H6H low borderline
FexcContig479170243600.1 Alkaloid H6H low borderline
FexcContig479170243600.2 Alkaloid H6H low borderline
FexcContig479170243600.3 Alkaloid H6H low borderline
FexcContig4900247620.1 Alkaloid H6H low borderline
FexcContig49100248040.1 Alkaloid H6H low borderline
FexcContig49100248040.2 Alkaloid H6H low borderline
FexcContig51730257560.1 Alkaloid H6H high pass
FexcContig51730257560.2 Alkaloid H6H high pass
FexcContig5250261380.1 Alkaloid H6H medium borderline