PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
FexcContig117820020920.1 Alkaloid IO medium borderline
FexcContig120022470.1 Alkaloid IO medium borderline
FexcContig120022470.2 Alkaloid IO medium borderline
FexcContig15910056330.1 Alkaloid IO medium borderline
FexcContig16760062820.1 Alkaloid IO low borderline
FexcContig17050065250.1 Alkaloid IO low borderline
FexcContig18150073820.1 Alkaloid IO low borderline
FexcContig18450076400.1 Alkaloid IO medium borderline
FexcContig18450076410.1 Alkaloid IO medium borderline
FexcContig18450076420.1 Alkaloid IO medium borderline
FexcContig2300110860.1 Alkaloid IO medium borderline
FexcContig2480123830.1 Alkaloid IO medium borderline
FexcContig263970135110.1 Alkaloid IO low borderline
FexcContig284330148480.1 Alkaloid IO medium pass
FexcContig29600155640.1 Alkaloid IO medium borderline
FexcContig32140169910.1 Alkaloid IO low borderline
FexcContig32830173900.1 Alkaloid IO low borderline
FexcContig39380208020.1 Alkaloid IO medium borderline
FexcContig42010220910.1 Alkaloid IO low borderline
FexcContig4290223880.1 Alkaloid IO low borderline
FexcContig43280225750.2 Alkaloid IO medium borderline
FexcContig4800244050.1 Alkaloid IO medium borderline
FexcContig4800244060.1 Alkaloid IO medium borderline
FexcContig49640249870.1 Alkaloid IO medium borderline
FexcContig60440293180.1 Alkaloid IO medium borderline
FexcContig636810302770.1 Alkaloid IO medium borderline
FexcContig66570310170.1 Alkaloid IO low borderline
FexcContig71610323640.1 Alkaloid IO medium borderline
FexcContig750540331370.1 Alkaloid IO low borderline
FexcContig760333540.1 Alkaloid IO medium borderline
FexcContig760333540.2 Alkaloid IO medium borderline
FexcContig7940342020.1 Alkaloid IO medium borderline
FexcContig818240348430.1 Alkaloid IO medium pass
FexcContig818240348440.1 Alkaloid IO high pass
FexcContig83210352100.1 Alkaloid IO medium borderline
FexcContig83330352430.1 Alkaloid IO medium borderline
FexcContig8360352950.1 Alkaloid IO low borderline
FexcContig8540357590.1 Alkaloid IO medium borderline
FexcContig900369340.1 Alkaloid IO low borderline
FexcContig90690370700.1 Alkaloid IO medium borderline
FexcContig94020377180.1 Alkaloid IO low borderline