PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
FexcContig100990002680.1 Phenylpropanoid HCT low borderline
FexcContig100990002690.1 Phenylpropanoid HCT low borderline
FexcContig12680028350.1 Phenylpropanoid HCT low borderline
FexcContig12740028730.1 Phenylpropanoid HCT low borderline
FexcContig12740028740.1 Phenylpropanoid HCT low borderline
FexcContig14260043330.1 Phenylpropanoid HCT low borderline
FexcContig14780047240.1 Phenylpropanoid HCT medium pass
FexcContig147960047320.1 Phenylpropanoid HCT medium pass
FexcContig15540053520.1 Phenylpropanoid HCT medium pass
FexcContig15540053520.2 Phenylpropanoid HCT medium pass
FexcContig22300106070.1 Phenylpropanoid HCT low borderline
FexcContig2290109970.1 Phenylpropanoid HCT low borderline
FexcContig24660122810.1 Phenylpropanoid HCT low borderline
FexcContig27360140630.1 Phenylpropanoid HCT medium pass
FexcContig27360140630.2 Phenylpropanoid HCT medium pass
FexcContig29320154190.1 Phenylpropanoid HCT medium pass
FexcContig29370154500.1 Phenylpropanoid HCT medium pass
FexcContig32160170140.1 Phenylpropanoid HCT low borderline
FexcContig35360187570.1 Phenylpropanoid HCT low borderline
FexcContig37440198190.1 Phenylpropanoid HCT medium pass
FexcContig38150201920.1 Phenylpropanoid HCT medium pass
FexcContig38610204430.1 Phenylpropanoid HCT low borderline
FexcContig39830210060.1 Phenylpropanoid HCT medium pass
FexcContig42840223600.1 Phenylpropanoid HCT medium pass
FexcContig46270237220.1 Phenylpropanoid HCT medium pass
FexcContig5210259580.1 Phenylpropanoid HCT medium pass
FexcContig5540272660.1 Phenylpropanoid HCT medium pass
FexcContig56370277050.1 Phenylpropanoid HCT low borderline
FexcContig57810282390.1 Phenylpropanoid HCT medium pass
FexcContig57810282390.2 Phenylpropanoid HCT medium pass
FexcContig60250292490.1 Phenylpropanoid HCT medium pass
FexcContig60250292500.1 Phenylpropanoid HCT medium pass
FexcContig6860315590.1 Phenylpropanoid HCT low borderline
FexcContig800690344160.1 Phenylpropanoid HCT medium pass
FexcContig9210373510.1 Phenylpropanoid HCT low borderline
FexcContig96000381230.1 Phenylpropanoid HCT medium pass
FexcContig96000381230.2 Phenylpropanoid HCT medium pass
FexcContig9670382570.1 Phenylpropanoid HCT medium pass