PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig10790011650.1 Alkaloid G8O/G8H low borderline
FexcContig124190026540.1 Alkaloid G8O/G8H medium borderline
FexcContig13330034790.1 Alkaloid G8O/G8H medium borderline
FexcContig14640046430.1 Alkaloid G8O/G8H medium borderline
FexcContig152670051300.1 Alkaloid G8O/G8H low borderline
FexcContig16850063640.1 Alkaloid G8O/G8H low borderline
FexcContig170780065400.1 Alkaloid G8O/G8H medium borderline
FexcContig170780065400.2 Alkaloid G8O/G8H medium borderline
FexcContig2110097300.1 Alkaloid G8O/G8H medium borderline
FexcContig23480114610.1 Alkaloid G8O/G8H medium borderline
FexcContig36050190630.1 Alkaloid G8O/G8H medium borderline
FexcContig37120197140.1 Alkaloid G8O/G8H low borderline
FexcContig411760216430.1 Alkaloid G8O/G8H medium borderline
FexcContig41440217980.1 Alkaloid G8O/G8H medium borderline
FexcContig4290224110.1 Alkaloid G8O/G8H low borderline
FexcContig4370226910.1 Alkaloid G8O/G8H medium borderline
FexcContig550690271440.1 Alkaloid G8O/G8H medium borderline
FexcContig5590274850.1 Alkaloid G8O/G8H medium borderline
FexcContig70318960.1 Alkaloid G8O/G8H medium borderline
FexcContig70318960.2 Alkaloid G8O/G8H medium borderline
FexcContig7100322190.1 Alkaloid G8O/G8H low borderline
FexcContig7130322930.1 Alkaloid G8O/G8H medium borderline
FexcContig72620326160.1 Alkaloid G8O/G8H medium borderline
FexcContig76130334110.1 Alkaloid G8O/G8H medium borderline
FexcContig779300339090.1 Alkaloid G8O/G8H medium borderline
FexcContig808150345980.1 Alkaloid G8O/G8H medium borderline
FexcContig90690370690.1 Alkaloid G8O/G8H medium borderline
FexcContig92830374940.1 Alkaloid G8O/G8H medium borderline
FexcContig9700383300.2 Alkaloid G8O/G8H low borderline
FexcContig97270383590.1 Alkaloid G8O/G8H medium borderline