PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
Reset
Gene Pathway Family Confidence Status Best Target
FexcContig104730008320.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig1080011670.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig1210023800.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig1210023800.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig14270043420.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig14270043420.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig15990056610.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig16970064360.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig16990064640.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig18620077620.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig18620077630.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig189190080380.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig2430119840.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig24610122520.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig24610122520.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig24730123520.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig2580131400.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig27520141930.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig27530141980.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig29480155080.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig30500161040.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig331770175710.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig3630192220.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig36310192390.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig36690194330.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig38070201360.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig382620202440.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig383470202980.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig38420203470.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig38420203490.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig38750204990.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig392330207450.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig45330233850.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig45450234250.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig47640242220.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig48360245110.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig53970266620.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig53970266620.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig54410268600.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig550240271350.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig56560277680.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig56980279080.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig57820282490.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig610390295520.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig61970297700.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig61970297700.2 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig622720298300.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig678690313480.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig691010317160.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig69800318460.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH