PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
FexcContig13490036210.1 Terpenoid AACT medium borderline
FexcContig19050081560.1 Terpenoid AACT low borderline
FexcContig19050081560.2 Terpenoid AACT low borderline
FexcContig1920082820.1 Terpenoid AACT medium borderline
FexcContig19870087350.1 Terpenoid AACT medium pass
FexcContig20170090290.1 Terpenoid AACT low borderline
FexcContig233250113670.1 Terpenoid AACT medium borderline
FexcContig23960117580.1 Terpenoid AACT medium borderline
FexcContig2550128980.1 Terpenoid AACT medium borderline
FexcContig2550128980.2 Terpenoid AACT medium borderline
FexcContig2730140350.1 Terpenoid AACT medium borderline
FexcContig2730140350.2 Terpenoid AACT medium borderline
FexcContig2730140350.3 Terpenoid AACT medium borderline
FexcContig29290153980.1 Terpenoid AACT medium borderline
FexcContig29290153980.2 Terpenoid AACT medium borderline
FexcContig5390266500.1 Terpenoid AACT medium borderline
FexcContig5630276660.1 Terpenoid AACT medium borderline
FexcContig82200349760.1 Terpenoid AACT medium borderline
FexcContig82200349760.2 Terpenoid AACT medium borderline
FexcContig1000001250.1 Terpenoid BAHD medium pass
FexcContig10050001820.1 Terpenoid BAHD medium pass
FexcContig10080002380.1 Terpenoid BAHD medium pass
FexcContig10080002380.2 Terpenoid BAHD medium pass
FexcContig100990002680.1 Terpenoid BAHD medium pass
FexcContig100990002690.1 Terpenoid BAHD medium pass
FexcContig104970008940.1 Terpenoid BAHD medium pass
FexcContig10530009440.1 Terpenoid BAHD medium pass
FexcContig1170020040.1 Terpenoid BAHD medium pass
FexcContig118630021520.1 Terpenoid BAHD medium pass
FexcContig1190021670.1 Terpenoid BAHD low borderline
FexcContig1210023710.1 Terpenoid BAHD medium pass
FexcContig12310025440.1 Terpenoid BAHD medium pass
FexcContig12310025440.2 Terpenoid BAHD medium pass
FexcContig12310025440.3 Terpenoid BAHD medium pass
FexcContig12310025440.4 Terpenoid BAHD medium pass
FexcContig12310025520.1 Terpenoid BAHD medium pass
FexcContig12310025520.2 Terpenoid BAHD medium pass
FexcContig12310025540.1 Terpenoid BAHD medium pass
FexcContig125650027640.1 Terpenoid BAHD medium pass
FexcContig12680028350.1 Terpenoid BAHD low borderline
FexcContig12740028730.1 Terpenoid BAHD medium pass
FexcContig12740028740.1 Terpenoid BAHD medium pass
FexcContig1280029340.1 Terpenoid BAHD medium pass
FexcContig128720030220.1 Terpenoid BAHD medium pass
FexcContig13140032540.1 Terpenoid BAHD low borderline
FexcContig13210033560.1 Terpenoid BAHD medium pass
FexcContig13260034010.1 Terpenoid BAHD medium pass
FexcContig13290034220.1 Terpenoid BAHD medium pass
FexcContig13600037340.1 Terpenoid BAHD medium pass
FexcContig13850039830.1 Terpenoid BAHD low borderline