PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
FexcContig11870021590.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig13510036640.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig14650046510.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig16070057670.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig16270058890.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig16460060460.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig17150066100.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig1880079010.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig2150100130.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig239120117220.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig240117800.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig24730123480.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig28010145260.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig30160159320.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig334560176810.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig35210186580.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig35500188490.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig35740189490.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig37300197740.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig38290202480.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig38990206010.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig39860210130.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig40500213400.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig42990224410.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig42990224410.2 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig43130225260.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig44540230250.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig44700230830.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig44700230830.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig44700230830.3 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig4620236990.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig4760242110.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig52120259720.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig52120259720.2 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig52120259730.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig53330264300.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig5430268300.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig562830276440.1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig571300279840.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig6900316900.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig700319170.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig700319180.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig700319190.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig700319200.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig720324510.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig73230327440.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig7500331280.1 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
FexcContig830570351800.1 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig85310357390.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
FexcContig9230373910.1 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL