PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
FexcContig10370006770.1 Alkaloid T16H medium borderline
FexcContig105300009480.1 Alkaloid T16H medium borderline
FexcContig10570009870.1 Alkaloid T16H medium borderline
FexcContig12650028240.1 Alkaloid T16H medium borderline
FexcContig140180041570.1 Alkaloid T16H medium borderline
FexcContig14880047910.1 Alkaloid T16H medium borderline
FexcContig14880047910.2 Alkaloid T16H medium borderline
FexcContig1500049250.1 Alkaloid T16H medium borderline
FexcContig1500049250.2 Alkaloid T16H medium borderline
FexcContig1500049250.3 Alkaloid T16H medium borderline
FexcContig15510053400.1 Alkaloid T16H medium borderline
FexcContig1630059200.1 Alkaloid T16H medium borderline
FexcContig1640060050.1 Alkaloid T16H medium borderline
FexcContig17050065250.3 Alkaloid T16H medium borderline
FexcContig17460068300.1 Alkaloid T16H low borderline
FexcContig19450084280.1 Alkaloid T16H medium borderline
FexcContig2030091650.1 Alkaloid T16H low borderline
FexcContig231790112230.1 Alkaloid T16H medium borderline
FexcContig23190112370.1 Alkaloid T16H low borderline
FexcContig239260117330.1 Alkaloid T16H medium borderline
FexcContig247930123800.1 Alkaloid T16H medium borderline
FexcContig25250126860.1 Alkaloid T16H medium borderline
FexcContig25250126860.2 Alkaloid T16H medium borderline
FexcContig27650142600.1 Alkaloid T16H medium borderline
FexcContig3610190850.1 Alkaloid T16H low borderline
FexcContig3610190850.2 Alkaloid T16H low borderline
FexcContig39920210510.1 Alkaloid T16H medium borderline
FexcContig41020215530.1 Alkaloid T16H medium borderline
FexcContig4290223840.1 Alkaloid T16H medium borderline
FexcContig453520233940.1 Alkaloid T16H medium borderline
FexcContig459230236050.1 Alkaloid T16H medium borderline
FexcContig50900254630.1 Alkaloid T16H medium borderline
FexcContig52750262430.1 Alkaloid T16H medium borderline
FexcContig54190267680.1 Alkaloid T16H medium borderline
FexcContig58770285960.1 Alkaloid T16H medium borderline
FexcContig58790285990.1 Alkaloid T16H medium borderline
FexcContig59410288970.1 Alkaloid T16H medium borderline
FexcContig59410288970.2 Alkaloid T16H medium borderline
FexcContig62450298830.1 Alkaloid T16H medium borderline
FexcContig6270299480.1 Alkaloid T16H medium borderline
FexcContig68500315410.1 Alkaloid T16H medium borderline
FexcContig6920317280.1 Alkaloid T16H medium borderline
FexcContig71940324390.1 Alkaloid T16H medium borderline
FexcContig772160337500.1 Alkaloid T16H medium pass
FexcContig91250371580.1 Alkaloid T16H medium borderline