PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
FexcContig1000001290.1 Flavonoid IFS medium borderline
FexcContig1000001290.2 Flavonoid IFS medium borderline
FexcContig100350001650.1 Flavonoid IFS low borderline
FexcContig102050004420.1 Flavonoid IFS medium borderline
FexcContig10370006760.1 Flavonoid IFS medium borderline
FexcContig10370006770.1 Flavonoid IFS medium borderline
FexcContig104290007840.1 Flavonoid IFS low borderline
FexcContig104310008000.1 Flavonoid IFS medium borderline
FexcContig10570009870.1 Flavonoid IFS medium borderline
FexcContig10590009970.1 Flavonoid IFS medium borderline
FexcContig11230015820.1 Flavonoid IFS low borderline
FexcContig117600020780.1 Flavonoid IFS low borderline
FexcContig11820021240.1 Flavonoid IFS low borderline
FexcContig12070023540.1 Flavonoid IFS low borderline
FexcContig12070023540.2 Flavonoid IFS low borderline
FexcContig12190024440.1 Flavonoid IFS low borderline
FexcContig12190024440.2 Flavonoid IFS low borderline
FexcContig124190026540.1 Flavonoid IFS medium borderline
FexcContig12420026570.1 Flavonoid IFS medium borderline
FexcContig12750028850.1 Flavonoid IFS low borderline
FexcContig13330034790.1 Flavonoid IFS low borderline
FexcContig13330034810.1 Flavonoid IFS medium borderline
FexcContig13460035890.1 Flavonoid IFS medium borderline
FexcContig13490036240.2 Flavonoid IFS medium borderline
FexcContig13490036240.3 Flavonoid IFS medium borderline
FexcContig13720038800.1 Flavonoid IFS medium borderline
FexcContig13720038800.2 Flavonoid IFS medium borderline
FexcContig13880040110.1 Flavonoid IFS medium borderline
FexcContig140180041570.1 Flavonoid IFS low borderline
FexcContig14260043340.1 Flavonoid IFS medium borderline
FexcContig14640046430.1 Flavonoid IFS medium borderline
FexcContig14850047620.1 Flavonoid IFS low borderline
FexcContig14880047880.1 Flavonoid IFS medium borderline
FexcContig14880047900.1 Flavonoid IFS medium borderline
FexcContig14880047910.1 Flavonoid IFS medium borderline
FexcContig14880047910.2 Flavonoid IFS medium borderline
FexcContig1500049250.1 Flavonoid IFS low borderline
FexcContig1500049250.2 Flavonoid IFS low borderline
FexcContig1500049250.3 Flavonoid IFS low borderline
FexcContig15300051700.1 Flavonoid IFS medium borderline
FexcContig16230058760.1 Flavonoid IFS medium borderline
FexcContig16230058790.1 Flavonoid IFS medium borderline
FexcContig16260058870.1 Flavonoid IFS low borderline
FexcContig16300059290.1 Flavonoid IFS low borderline
FexcContig1630059200.1 Flavonoid IFS low borderline
FexcContig16530061100.1 Flavonoid IFS low borderline
FexcContig16530061110.1 Flavonoid IFS low borderline
FexcContig17050065250.1 Flavonoid IFS low borderline
FexcContig17050065250.2 Flavonoid IFS low borderline
FexcContig17050065250.3 Flavonoid IFS low borderline