PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
FexcContig10260005090.1 Phenylpropanoid COMT medium pass
FexcContig11430017720.1 Phenylpropanoid COMT medium pass
FexcContig11600019190.1 Phenylpropanoid COMT low borderline
FexcContig11600019190.2 Phenylpropanoid COMT low borderline
FexcContig11680019680.1 Phenylpropanoid COMT low borderline
FexcContig18740078610.1 Phenylpropanoid COMT medium pass
FexcContig19190082570.1 Phenylpropanoid COMT medium pass
FexcContig19220083040.1 Phenylpropanoid COMT medium pass
FexcContig23350113790.1 Phenylpropanoid COMT medium pass
FexcContig2360115280.1 Phenylpropanoid COMT medium pass
FexcContig236980115910.1 Phenylpropanoid COMT medium pass
FexcContig23940117530.1 Phenylpropanoid COMT medium pass
FexcContig23940117540.1 Phenylpropanoid COMT low borderline
FexcContig23940117550.1 Phenylpropanoid COMT medium pass
FexcContig2660136190.1 Phenylpropanoid COMT medium pass
FexcContig31190164220.1 Phenylpropanoid COMT medium pass
FexcContig323550171150.1 Phenylpropanoid COMT medium pass
FexcContig323550171170.1 Phenylpropanoid COMT medium pass
FexcContig323550171170.2 Phenylpropanoid COMT medium pass
FexcContig402120212050.1 Phenylpropanoid COMT low borderline
FexcContig49880251140.1 Phenylpropanoid COMT medium pass
FexcContig51300256120.1 Phenylpropanoid COMT medium pass
FexcContig5360264990.1 Phenylpropanoid COMT low borderline
FexcContig74270329800.1 Phenylpropanoid COMT low borderline
FexcContig8370353080.1 Phenylpropanoid COMT medium pass
FexcContig89920368850.1 Phenylpropanoid COMT medium pass
FexcContig9210373520.1 Phenylpropanoid COMT medium pass