PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
Reset
Gene Pathway Family Confidence Status
FexcContig10160003680.1 Steroid CYP90D1 low borderline
FexcContig10590009970.1 Steroid CYP90D1 low borderline
FexcContig117820020920.1 Steroid CYP90D1 low borderline
FexcContig13460035890.1 Steroid CYP90D1 low borderline
FexcContig13880040110.1 Steroid CYP90D1 low borderline
FexcContig1500049250.2 Steroid CYP90D1 medium borderline
FexcContig1500049250.3 Steroid CYP90D1 medium borderline
FexcContig15910056330.1 Steroid CYP90D1 low borderline
FexcContig16530061100.1 Steroid CYP90D1 medium borderline
FexcContig17330067500.1 Steroid CYP90D1 low borderline
FexcContig18150073820.1 Steroid CYP90D1 medium borderline
FexcContig18150073820.2 Steroid CYP90D1 medium borderline
FexcContig18290074950.2 Steroid CYP90D1 low borderline
FexcContig18290074950.3 Steroid CYP90D1 low borderline
FexcContig18360075640.1 Steroid CYP90D1 medium borderline
FexcContig18450076400.1 Steroid CYP90D1 low borderline
FexcContig2110097320.1 Steroid CYP90D1 low borderline
FexcContig2110097320.2 Steroid CYP90D1 low borderline
FexcContig21340099130.1 Steroid CYP90D1 low borderline
FexcContig22150105030.1 Steroid CYP90D1 low borderline
FexcContig22150105030.2 Steroid CYP90D1 low borderline
FexcContig22440107060.1 Steroid CYP90D1 medium borderline
FexcContig2390117070.1 Steroid CYP90D1 low borderline
FexcContig2660136140.1 Steroid CYP90D1 low borderline
FexcContig29670156010.1 Steroid CYP90D1 low borderline
FexcContig29670156020.1 Steroid CYP90D1 low borderline
FexcContig31370165150.1 Steroid CYP90D1 medium borderline
FexcContig37890200260.1 Steroid CYP90D1 low borderline
FexcContig39880210290.1 Steroid CYP90D1 low borderline
FexcContig40980215100.1 Steroid CYP90D1 low borderline
FexcContig4290223880.1 Steroid CYP90D1 medium borderline
FexcContig43280225750.1 Steroid CYP90D1 low borderline
FexcContig43280225750.2 Steroid CYP90D1 low borderline
FexcContig482700244920.1 Steroid CYP90D1 low borderline
FexcContig49380249120.1 Steroid CYP90D1 medium borderline
FexcContig50110252220.1 Steroid CYP90D1 low borderline
FexcContig50310252880.1 Steroid CYP90D1 low borderline
FexcContig52410260910.1 Steroid CYP90D1 medium borderline
FexcContig52750262430.1 Steroid CYP90D1 low borderline
FexcContig57170279920.1 Steroid CYP90D1 low borderline
FexcContig60280292720.1 Steroid CYP90D1 low borderline
FexcContig6310300770.1 Steroid CYP90D1 low borderline
FexcContig636810302770.1 Steroid CYP90D1 low borderline
FexcContig66570310170.1 Steroid CYP90D1 low borderline
FexcContig67120311850.1 Steroid CYP90D1 low borderline
FexcContig70318890.1 Steroid CYP90D1 low borderline
FexcContig7050320980.1 Steroid CYP90D1 medium borderline
FexcContig7200324730.1 Steroid CYP90D1 low borderline
FexcContig7600333740.1 Steroid CYP90D1 low borderline
FexcContig76630335570.1 Steroid CYP90D1 low borderline