PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status
FexcContig10370006770.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig11130014670.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig12650028240.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig12650028250.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig13720038800.2 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig14880047880.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig14880047900.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig18450076400.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig2300110870.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig2480123830.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig25250126860.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig25250126860.2 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig2860149080.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig2860149080.2 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig36760194740.1 Phenylpropanoid F5H/CYP84A low borderline
FexcContig4290224110.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig50251500.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig54190267680.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig5590274850.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig60440293180.2 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig6550307670.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig6920317280.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig7880340820.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig818240348430.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig92120373660.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig92830374940.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig97270383590.1 Phenylpropanoid F5H/CYP84A medium borderline