PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
FexcContig50251500.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig5070253930.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig51430256450.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig51430256450.2 Steroid BR6OX2/CYP85A2 low borderline
FexcContig5340264490.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig55390272570.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig5680278530.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig57320280560.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig624150298760.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig6270299480.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig68500315410.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig6920317280.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig71610323640.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig72800326610.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig740328960.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig740328970.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig7560332530.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig783900339920.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig7880340820.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig80080344200.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig818240348440.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig83210352100.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig83960353740.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig85340357450.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig86680360620.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig870361260.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig8790363410.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig8790363410.2 Steroid BR6OX2/CYP85A2 low borderline
FexcContig8940367440.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig89550367940.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig8980368410.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig90690370700.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig91250371580.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig94020377180.1 Steroid BR6OX2/CYP85A2 medium borderline
FexcContig97750384320.2 Steroid BR6OX2/CYP85A2 low borderline