PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
FexcContig20630094160.1 Rosmarinic Acid C4H medium pass
FexcContig20940096250.1 Rosmarinic Acid C4H low borderline
FexcContig2110097320.1 Rosmarinic Acid C4H low borderline
FexcContig2110097320.2 Rosmarinic Acid C4H low borderline
FexcContig21340099130.1 Rosmarinic Acid C4H medium pass
FexcContig22150105030.1 Rosmarinic Acid C4H low borderline
FexcContig22150105030.2 Rosmarinic Acid C4H low borderline
FexcContig22190105230.1 Rosmarinic Acid C4H low borderline
FexcContig22440107060.1 Rosmarinic Acid C4H low borderline
FexcContig22520107510.1 Rosmarinic Acid C4H low borderline
FexcContig2300110860.1 Rosmarinic Acid C4H low borderline
FexcContig2300110870.1 Rosmarinic Acid C4H low borderline
FexcContig2300110870.2 Rosmarinic Acid C4H low borderline
FexcContig231790112230.1 Rosmarinic Acid C4H low borderline
FexcContig23480114610.1 Rosmarinic Acid C4H low borderline
FexcContig2390117070.1 Rosmarinic Acid C4H low borderline
FexcContig239260117330.1 Rosmarinic Acid C4H low borderline
FexcContig24070118480.1 Rosmarinic Acid C4H low borderline
FexcContig24270119720.1 Rosmarinic Acid C4H low borderline
FexcContig24450121200.1 Rosmarinic Acid C4H low borderline
FexcContig2470123060.1 Rosmarinic Acid C4H medium pass
FexcContig2470123070.1 Rosmarinic Acid C4H medium pass
FexcContig247930123800.1 Rosmarinic Acid C4H low borderline
FexcContig2480123830.1 Rosmarinic Acid C4H low borderline
FexcContig24830124090.1 Rosmarinic Acid C4H medium pass
FexcContig2660136140.1 Rosmarinic Acid C4H low borderline
FexcContig27650142600.1 Rosmarinic Acid C4H low borderline
FexcContig27720143270.1 Rosmarinic Acid C4H low borderline
FexcContig27870144200.1 Rosmarinic Acid C4H low borderline
FexcContig27870144200.2 Rosmarinic Acid C4H low borderline
FexcContig28140146310.1 Rosmarinic Acid C4H low borderline
FexcContig28140146330.1 Rosmarinic Acid C4H low borderline
FexcContig28140146340.1 Rosmarinic Acid C4H low borderline
FexcContig28140146350.1 Rosmarinic Acid C4H low borderline
FexcContig2860149080.1 Rosmarinic Acid C4H low borderline
FexcContig2860149080.2 Rosmarinic Acid C4H low borderline
FexcContig29270153890.1 Rosmarinic Acid C4H low borderline
FexcContig29600155640.1 Rosmarinic Acid C4H low borderline
FexcContig29670156010.1 Rosmarinic Acid C4H low borderline
FexcContig29670156020.1 Rosmarinic Acid C4H low borderline
FexcContig300158340.1 Rosmarinic Acid C4H medium pass
FexcContig30970162870.1 Rosmarinic Acid C4H low borderline
FexcContig30970162870.2 Rosmarinic Acid C4H low borderline
FexcContig3120164280.1 Rosmarinic Acid C4H low borderline
FexcContig31720166970.1 Rosmarinic Acid C4H low borderline
FexcContig32140169910.2 Rosmarinic Acid C4H low borderline
FexcContig32950174540.1 Rosmarinic Acid C4H medium pass
FexcContig33000174920.1 Rosmarinic Acid C4H low borderline
FexcContig33740178140.1 Rosmarinic Acid C4H low borderline
FexcContig34550183140.1 Rosmarinic Acid C4H low borderline