PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status
FexcContig71610323570.1 Phenylpropanoid CAD low borderline
FexcContig71610323570.2 Phenylpropanoid CAD low borderline
FexcContig77470338020.1 Phenylpropanoid CAD medium borderline
FexcContig8030344640.1 Phenylpropanoid CAD low borderline
FexcContig8030344640.2 Phenylpropanoid CAD low borderline
FexcContig8030344640.3 Phenylpropanoid CAD low borderline
FexcContig8030344650.1 Phenylpropanoid CAD low borderline
FexcContig8030344650.2 Phenylpropanoid CAD low borderline
FexcContig805020345220.1 Phenylpropanoid CAD low borderline
FexcContig80970346620.1 Phenylpropanoid CAD medium pass
FexcContig80970346620.2 Phenylpropanoid CAD medium pass
FexcContig80970346620.3 Phenylpropanoid CAD medium pass
FexcContig80970346620.4 Phenylpropanoid CAD medium pass
FexcContig8130347480.1 Phenylpropanoid CAD medium pass
FexcContig8130347480.2 Phenylpropanoid CAD medium pass
FexcContig8130347480.3 Phenylpropanoid CAD medium pass
FexcContig8370353150.1 Phenylpropanoid CAD low borderline
FexcContig8370353160.1 Phenylpropanoid CAD low borderline
FexcContig85410357690.1 Phenylpropanoid CAD medium pass
FexcContig85410357690.2 Phenylpropanoid CAD medium pass
FexcContig86260359510.1 Phenylpropanoid CAD medium borderline
FexcContig865770360300.1 Phenylpropanoid CAD medium pass
FexcContig8720361800.1 Phenylpropanoid CAD medium borderline
FexcContig89000366630.1 Phenylpropanoid CAD medium pass
FexcContig89720368210.1 Phenylpropanoid CAD medium pass
FexcContig90670370660.1 Phenylpropanoid CAD medium pass
FexcContig90670370670.1 Phenylpropanoid CAD medium pass
FexcContig90670370680.1 Phenylpropanoid CAD medium pass
FexcContig92470374340.1 Phenylpropanoid CAD medium borderline
FexcContig92790374750.1 Phenylpropanoid CAD medium pass
FexcContig92790374750.2 Phenylpropanoid CAD medium pass
FexcContig92970375170.1 Phenylpropanoid CAD low borderline
FexcContig95670380510.1 Phenylpropanoid CAD medium borderline
FexcContig97310383680.1 Phenylpropanoid CAD medium pass
FexcContig98720386350.1 Phenylpropanoid CAD low borderline
FexcContig98720386350.2 Phenylpropanoid CAD low borderline