PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
FexcContig1000001290.1 Terpenoid CYP76 medium borderline
FexcContig1000001290.2 Terpenoid CYP76 medium borderline
FexcContig10120003060.1 Terpenoid CYP76 low borderline
FexcContig10160003690.1 Terpenoid CYP76 medium borderline
FexcContig10370006760.1 Terpenoid CYP76 medium borderline
FexcContig10370006770.1 Terpenoid CYP76 medium pass
FexcContig105300009480.1 Terpenoid CYP76 medium borderline
FexcContig10590009970.1 Terpenoid CYP76 medium borderline
FexcContig10790011650.1 Terpenoid CYP76 low borderline
FexcContig11130014670.1 Terpenoid CYP76 medium borderline
FexcContig1140017460.1 Terpenoid CYP76 low borderline
FexcContig11650019610.1 Terpenoid CYP76 low borderline
FexcContig117820020920.1 Terpenoid CYP76 medium borderline
FexcContig120022470.1 Terpenoid CYP76 medium pass
FexcContig120022470.2 Terpenoid CYP76 medium pass
FexcContig124190026540.1 Terpenoid CYP76 medium pass
FexcContig12810029680.1 Terpenoid CYP76 low borderline
FexcContig13330034810.1 Terpenoid CYP76 medium pass
FexcContig13460035890.1 Terpenoid CYP76 medium borderline
FexcContig13490036240.1 Terpenoid CYP76 medium borderline
FexcContig13490036240.2 Terpenoid CYP76 medium pass
FexcContig13490036240.3 Terpenoid CYP76 medium pass
FexcContig13720038800.1 Terpenoid CYP76 medium borderline
FexcContig13720038800.2 Terpenoid CYP76 medium borderline
FexcContig13880040110.1 Terpenoid CYP76 medium borderline
FexcContig14260043340.1 Terpenoid CYP76 medium borderline
FexcContig14640046430.1 Terpenoid CYP76 medium pass
FexcContig152670051300.1 Terpenoid CYP76 medium pass
FexcContig15300051700.1 Terpenoid CYP76 medium borderline
FexcContig15510053400.1 Terpenoid CYP76 medium pass
FexcContig15910056330.1 Terpenoid CYP76 medium borderline
FexcContig1630059230.1 Terpenoid CYP76 medium pass
FexcContig1640060050.1 Terpenoid CYP76 medium pass
FexcContig16440060300.1 Terpenoid CYP76 medium borderline
FexcContig16850063640.1 Terpenoid CYP76 low borderline
FexcContig170780065400.1 Terpenoid CYP76 medium pass
FexcContig170780065400.2 Terpenoid CYP76 medium pass
FexcContig1750068770.1 Terpenoid CYP76 low borderline
FexcContig17940072080.1 Terpenoid CYP76 medium borderline
FexcContig18450076400.1 Terpenoid CYP76 medium borderline
FexcContig18450076410.1 Terpenoid CYP76 medium pass
FexcContig18450076420.1 Terpenoid CYP76 medium pass
FexcContig193160083740.1 Terpenoid CYP76 medium borderline
FexcContig19450084280.1 Terpenoid CYP76 medium pass
FexcContig2050093320.1 Terpenoid CYP76 medium pass
FexcContig20630094160.1 Terpenoid CYP76 medium borderline
FexcContig20940096250.1 Terpenoid CYP76 low borderline
FexcContig2110097300.1 Terpenoid CYP76 low borderline
FexcContig2110097320.1 Terpenoid CYP76 medium borderline
FexcContig2110097320.2 Terpenoid CYP76 medium borderline