PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
FexcContig2300110860.1 Terpenoid CYP76 medium pass
FexcContig2300110870.1 Terpenoid CYP76 medium pass
FexcContig2300110870.2 Terpenoid CYP76 medium pass
FexcContig231790112230.1 Terpenoid CYP76 medium pass
FexcContig23480114610.1 Terpenoid CYP76 medium pass
FexcContig24410120950.1 Terpenoid CYP76 low borderline
FexcContig2470123060.1 Terpenoid CYP76 medium borderline
FexcContig2470123070.1 Terpenoid CYP76 medium borderline
FexcContig2480123830.1 Terpenoid CYP76 medium pass
FexcContig24830124090.1 Terpenoid CYP76 medium pass
FexcContig25250126860.1 Terpenoid CYP76 low borderline
FexcContig25250126860.2 Terpenoid CYP76 low borderline
FexcContig26310134820.1 Terpenoid CYP76 low borderline
FexcContig26310134830.1 Terpenoid CYP76 low borderline
FexcContig27650142600.1 Terpenoid CYP76 low borderline
FexcContig27720143270.1 Terpenoid CYP76 medium pass
FexcContig28140146310.1 Terpenoid CYP76 low borderline
FexcContig284330148480.1 Terpenoid CYP76 medium pass
FexcContig29600155640.1 Terpenoid CYP76 low borderline
FexcContig300158340.1 Terpenoid CYP76 medium borderline
FexcContig3120164280.1 Terpenoid CYP76 medium borderline
FexcContig32510172240.1 Terpenoid CYP76 low borderline
FexcContig32950174540.1 Terpenoid CYP76 medium pass
FexcContig34550183140.1 Terpenoid CYP76 low borderline
FexcContig36050190630.1 Terpenoid CYP76 low borderline
FexcContig36210191690.1 Terpenoid CYP76 low borderline
FexcContig37360197910.1 Terpenoid CYP76 medium borderline
FexcContig37720199590.1 Terpenoid CYP76 medium borderline
FexcContig37790199760.1 Terpenoid CYP76 medium borderline
FexcContig3930207660.1 Terpenoid CYP76 medium borderline
FexcContig39380208020.1 Terpenoid CYP76 medium borderline
FexcContig39880210280.1 Terpenoid CYP76 medium borderline
FexcContig39880210290.1 Terpenoid CYP76 medium borderline
FexcContig41020215530.1 Terpenoid CYP76 low borderline
FexcContig41820219870.1 Terpenoid CYP76 low borderline
FexcContig4290223840.1 Terpenoid CYP76 medium pass
FexcContig4290224110.1 Terpenoid CYP76 low borderline
FexcContig429480224370.1 Terpenoid CYP76 medium borderline
FexcContig43280225750.1 Terpenoid CYP76 medium borderline
FexcContig43280225750.2 Terpenoid CYP76 medium borderline
FexcContig4370226910.1 Terpenoid CYP76 medium pass
FexcContig44900231630.1 Terpenoid CYP76 medium borderline
FexcContig459230236050.1 Terpenoid CYP76 medium pass
FexcContig4800244050.1 Terpenoid CYP76 medium borderline
FexcContig4800244060.1 Terpenoid CYP76 medium borderline
FexcContig49380249120.1 Terpenoid CYP76 medium borderline
FexcContig49640249870.1 Terpenoid CYP76 low borderline
FexcContig5000251760.1 Terpenoid CYP76 medium pass
FexcContig50110252220.1 Terpenoid CYP76 medium borderline
FexcContig50251500.1 Terpenoid CYP76 low borderline