PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
FexcContig5070253930.1 Terpenoid CYP76 medium borderline
FexcContig50900254630.1 Terpenoid CYP76 medium borderline
FexcContig5110255350.1 Terpenoid CYP76 medium borderline
FexcContig51180255650.1 Terpenoid CYP76 medium borderline
FexcContig51430256450.1 Terpenoid CYP76 low borderline
FexcContig51430256450.2 Terpenoid CYP76 low borderline
FexcContig51810258050.1 Terpenoid CYP76 low borderline
FexcContig5340264490.1 Terpenoid CYP76 medium borderline
FexcContig54190267680.1 Terpenoid CYP76 low borderline
FexcContig54440268650.1 Terpenoid CYP76 medium borderline
FexcContig550690271440.1 Terpenoid CYP76 medium borderline
FexcContig550690271440.2 Terpenoid CYP76 medium borderline
FexcContig5590274850.1 Terpenoid CYP76 medium pass
FexcContig56550277600.1 Terpenoid CYP76 medium pass
FexcContig56550277620.1 Terpenoid CYP76 medium borderline
FexcContig57320280560.1 Terpenoid CYP76 medium borderline
FexcContig58770285960.1 Terpenoid CYP76 medium pass
FexcContig58880286290.1 Terpenoid CYP76 low borderline
FexcContig59660289810.1 Terpenoid CYP76 low borderline
FexcContig59660289810.2 Terpenoid CYP76 low borderline
FexcContig59660289820.1 Terpenoid CYP76 low borderline
FexcContig60040291980.1 Terpenoid CYP76 low borderline
FexcContig60291510.1 Terpenoid CYP76 medium borderline
FexcContig60291520.1 Terpenoid CYP76 medium borderline
FexcContig60291530.1 Terpenoid CYP76 medium borderline
FexcContig60440293180.1 Terpenoid CYP76 medium borderline
FexcContig60440293180.2 Terpenoid CYP76 medium pass
FexcContig6270299480.1 Terpenoid CYP76 medium borderline
FexcContig6310300770.1 Terpenoid CYP76 medium borderline
FexcContig636810302770.1 Terpenoid CYP76 medium pass
FexcContig652020306980.1 Terpenoid CYP76 low borderline
FexcContig65680308120.1 Terpenoid CYP76 medium borderline
FexcContig65990308720.1 Terpenoid CYP76 medium pass
FexcContig663820309700.1 Terpenoid CYP76 medium borderline
FexcContig66570310170.1 Terpenoid CYP76 low borderline
FexcContig68500315410.1 Terpenoid CYP76 medium borderline
FexcContig6920317280.1 Terpenoid CYP76 low borderline
FexcContig70318890.1 Terpenoid CYP76 medium borderline
FexcContig70318960.1 Terpenoid CYP76 medium pass
FexcContig70318960.2 Terpenoid CYP76 medium pass
FexcContig7100322190.1 Terpenoid CYP76 low borderline
FexcContig7130322930.1 Terpenoid CYP76 low borderline
FexcContig71610323640.1 Terpenoid CYP76 medium pass
FexcContig7200324730.1 Terpenoid CYP76 medium borderline
FexcContig72620326160.1 Terpenoid CYP76 medium borderline
FexcContig72800326610.1 Terpenoid CYP76 low borderline
FexcContig73470327910.1 Terpenoid CYP76 low borderline
FexcContig740328950.1 Terpenoid CYP76 medium pass
FexcContig740328960.1 Terpenoid CYP76 medium pass
FexcContig740328970.1 Terpenoid CYP76 medium borderline