PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig10120003060.1 Steroid DWF4/CYP90B1 low borderline
FexcContig10370006770.1 Steroid DWF4/CYP90B1 low borderline
FexcContig104310008000.1 Steroid DWF4/CYP90B1 low borderline
FexcContig10570009870.1 Steroid DWF4/CYP90B1 low borderline
FexcContig11000013660.1 Steroid DWF4/CYP90B1 low borderline
FexcContig1140017460.1 Steroid DWF4/CYP90B1 low borderline
FexcContig1150018180.1 Steroid DWF4/CYP90B1 low borderline
FexcContig12070023540.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig12070023540.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig12190024440.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig12190024440.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig12420026570.1 Steroid DWF4/CYP90B1 low borderline
FexcContig12420026580.1 Steroid DWF4/CYP90B1 low borderline
FexcContig12420026580.2 Steroid DWF4/CYP90B1 low borderline
FexcContig12650028250.1 Steroid DWF4/CYP90B1 low borderline
FexcContig12750028850.1 Steroid DWF4/CYP90B1 low borderline
FexcContig12810029680.1 Steroid DWF4/CYP90B1 low borderline
FexcContig13330034790.1 Steroid DWF4/CYP90B1 low borderline
FexcContig13490036240.1 Steroid DWF4/CYP90B1 low borderline
FexcContig13490036240.2 Steroid DWF4/CYP90B1 low borderline
FexcContig13490036240.3 Steroid DWF4/CYP90B1 low borderline
FexcContig14260043340.1 Steroid DWF4/CYP90B1 low borderline
FexcContig14640046430.1 Steroid DWF4/CYP90B1 low borderline
FexcContig14880047910.1 Steroid DWF4/CYP90B1 low borderline
FexcContig14880047910.2 Steroid DWF4/CYP90B1 low borderline
FexcContig1500049250.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig15300051700.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig16300059280.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig16530061110.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig17050065250.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig17050065250.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig17050065250.3 Steroid DWF4/CYP90B1 medium borderline
FexcContig170780065400.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig170780065400.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig17940072080.1 Steroid DWF4/CYP90B1 low borderline
FexcContig18450076410.1 Steroid DWF4/CYP90B1 low borderline
FexcContig18450076420.1 Steroid DWF4/CYP90B1 low borderline
FexcContig193160083740.1 Steroid DWF4/CYP90B1 low borderline
FexcContig19450084280.1 Steroid DWF4/CYP90B1 low borderline
FexcContig19800086970.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig22190105230.1 Steroid DWF4/CYP90B1 low borderline
FexcContig2300110870.2 Steroid DWF4/CYP90B1 low borderline
FexcContig231790112230.1 Steroid DWF4/CYP90B1 low borderline
FexcContig239260117330.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig24070118480.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig24270119720.1 Steroid DWF4/CYP90B1 low borderline
FexcContig24410120950.1 Steroid DWF4/CYP90B1 low borderline
FexcContig263970135110.1 Steroid DWF4/CYP90B1 low borderline
FexcContig27650142600.1 Steroid DWF4/CYP90B1 low borderline
FexcContig27720143270.1 Steroid DWF4/CYP90B1 low borderline