PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
Reset
Gene Pathway Family Confidence Status
FexcContig27870144200.1 Steroid DWF4/CYP90B1 low borderline
FexcContig27870144200.2 Steroid DWF4/CYP90B1 low borderline
FexcContig28140146320.1 Steroid DWF4/CYP90B1 low borderline
FexcContig28460148540.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig30970162870.1 Steroid DWF4/CYP90B1 low borderline
FexcContig30970162870.2 Steroid DWF4/CYP90B1 low borderline
FexcContig31720166970.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig32140169910.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig32950174540.1 Steroid DWF4/CYP90B1 low borderline
FexcContig34550183140.1 Steroid DWF4/CYP90B1 low borderline
FexcContig35080185680.1 Steroid DWF4/CYP90B1 low borderline
FexcContig35480188130.1 Steroid DWF4/CYP90B1 low borderline
FexcContig35720189430.1 Steroid DWF4/CYP90B1 low borderline
FexcContig36210191690.1 Steroid DWF4/CYP90B1 low borderline
FexcContig37360197910.1 Steroid DWF4/CYP90B1 low borderline
FexcContig37790199760.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig38910205770.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig38910205770.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig3910206930.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig3910206930.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig39380208020.1 Steroid DWF4/CYP90B1 low borderline
FexcContig39880210300.1 Steroid DWF4/CYP90B1 low borderline
FexcContig41820219870.1 Steroid DWF4/CYP90B1 low borderline
FexcContig4200220890.1 Steroid DWF4/CYP90B1 low borderline
FexcContig42010220910.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig452300233420.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig459230236050.1 Steroid DWF4/CYP90B1 low borderline
FexcContig48380245150.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig49950251320.1 Steroid DWF4/CYP90B1 low borderline
FexcContig49950251320.2 Steroid DWF4/CYP90B1 low borderline
FexcContig5040253070.1 Steroid DWF4/CYP90B1 low borderline
FexcContig5040253070.2 Steroid DWF4/CYP90B1 low borderline
FexcContig5110255350.1 Steroid DWF4/CYP90B1 low borderline
FexcContig52050259280.1 Steroid DWF4/CYP90B1 low borderline
FexcContig52750262420.1 Steroid DWF4/CYP90B1 low borderline
FexcContig53210264060.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig54440268650.1 Steroid DWF4/CYP90B1 low borderline
FexcContig550690271440.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig550690271440.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig558580274700.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig56550277600.1 Steroid DWF4/CYP90B1 low borderline
FexcContig56550277620.1 Steroid DWF4/CYP90B1 low borderline
FexcContig58040283630.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig58770285960.1 Steroid DWF4/CYP90B1 low borderline
FexcContig58880286290.1 Steroid DWF4/CYP90B1 low borderline
FexcContig58880286300.1 Steroid DWF4/CYP90B1 low borderline
FexcContig59410288970.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig59410288970.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig59540289410.1 Steroid DWF4/CYP90B1 low borderline
FexcContig59660289810.1 Steroid DWF4/CYP90B1 low borderline