PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig59660289810.2 Steroid DWF4/CYP90B1 low borderline
FexcContig59660289820.1 Steroid DWF4/CYP90B1 low borderline
FexcContig60291510.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig60291520.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig60291530.1 Steroid DWF4/CYP90B1 low borderline
FexcContig60440293180.1 Steroid DWF4/CYP90B1 low borderline
FexcContig60440293180.2 Steroid DWF4/CYP90B1 low borderline
FexcContig6350302250.1 Steroid DWF4/CYP90B1 low borderline
FexcContig65110306750.1 Steroid DWF4/CYP90B1 low borderline
FexcContig6550307670.1 Steroid DWF4/CYP90B1 low borderline
FexcContig65680308120.1 Steroid DWF4/CYP90B1 low borderline
FexcContig663820309700.1 Steroid DWF4/CYP90B1 low borderline
FexcContig66480309960.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig70318960.1 Steroid DWF4/CYP90B1 low borderline
FexcContig70318960.2 Steroid DWF4/CYP90B1 low borderline
FexcContig7130322930.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig72030324800.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig73470327910.1 Steroid DWF4/CYP90B1 low borderline
FexcContig740328950.1 Steroid DWF4/CYP90B1 low borderline
FexcContig740329040.1 Steroid DWF4/CYP90B1 low borderline
FexcContig760333540.1 Steroid DWF4/CYP90B1 low borderline
FexcContig760333540.2 Steroid DWF4/CYP90B1 low borderline
FexcContig76130334110.1 Steroid DWF4/CYP90B1 low borderline
FexcContig7940342030.1 Steroid DWF4/CYP90B1 low borderline
FexcContig80080344210.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8210349440.1 Steroid DWF4/CYP90B1 low borderline
FexcContig82360350120.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig83330352430.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8360352950.1 Steroid DWF4/CYP90B1 low borderline
FexcContig85050356890.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8540357590.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8740362180.1 Steroid DWF4/CYP90B1 low borderline
FexcContig881370364250.1 Steroid DWF4/CYP90B1 low borderline
FexcContig88700365680.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8940367640.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig90870371040.1 Steroid DWF4/CYP90B1 low borderline
FexcContig92830374940.1 Steroid DWF4/CYP90B1 low borderline
FexcContig9480378410.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig95590380310.1 Steroid DWF4/CYP90B1 low borderline
FexcContig95900380820.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig9910387310.1 Steroid DWF4/CYP90B1 low borderline
FexcContig9910387320.1 Steroid DWF4/CYP90B1 low borderline