PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
Reset
Gene Pathway Family Confidence Status
FexcContig74810330850.1 Flavonoid F3H medium borderline
FexcContig74810330850.2 Flavonoid F3H medium borderline
FexcContig74810330850.3 Flavonoid F3H medium borderline
FexcContig753900331980.1 Flavonoid F3H medium borderline
FexcContig78220339690.1 Flavonoid F3H medium borderline
FexcContig78310339820.1 Flavonoid F3H medium borderline
FexcContig8250350450.1 Flavonoid F3H medium borderline
FexcContig838390353440.1 Flavonoid F3H medium borderline
FexcContig83850353470.1 Flavonoid F3H medium borderline
FexcContig8410354260.1 Flavonoid F3H low borderline
FexcContig8420354380.1 Flavonoid F3H low borderline
FexcContig849880356200.1 Flavonoid F3H medium borderline
FexcContig865830360310.1 Flavonoid F3H medium pass
FexcContig88480364890.1 Flavonoid F3H medium borderline
FexcContig88480364890.2 Flavonoid F3H medium borderline
FexcContig93410376100.1 Flavonoid F3H medium borderline
FexcContig94920378750.1 Flavonoid F3H medium borderline
FexcContig9520379400.1 Flavonoid F3H medium borderline
FexcContig9530379630.1 Flavonoid F3H low borderline