PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
FexcContig100001050.1 Alkaloid GS low borderline
FexcContig102990005670.1 Alkaloid GS high pass
FexcContig1030005880.1 Alkaloid GS medium pass
FexcContig11380017270.1 Alkaloid GS high pass
FexcContig12320025610.1 Alkaloid GS low borderline
FexcContig12560027620.1 Alkaloid GS low borderline
FexcContig12560027620.2 Alkaloid GS low borderline
FexcContig1330034510.1 Alkaloid GS medium pass
FexcContig1330034510.2 Alkaloid GS medium pass
FexcContig16030057240.1 Alkaloid GS high pass
FexcContig16030057240.2 Alkaloid GS high pass
FexcContig18380075750.1 Alkaloid GS low borderline
FexcContig19640085840.1 Alkaloid GS low borderline
FexcContig19640085850.1 Alkaloid GS low borderline
FexcContig201570090020.1 Alkaloid GS low borderline
FexcContig21870103140.1 Alkaloid GS low borderline
FexcContig24380120490.1 Alkaloid GS low borderline
FexcContig250124850.1 Alkaloid GS low borderline
FexcContig250124850.2 Alkaloid GS low borderline
FexcContig25700130610.1 Alkaloid GS low borderline
FexcContig26660136470.1 Alkaloid GS high pass
FexcContig27620142500.1 Alkaloid GS low borderline
FexcContig29950157370.1 Alkaloid GS low borderline
FexcContig29950157370.2 Alkaloid GS low borderline
FexcContig31220164560.1 Alkaloid GS low borderline
FexcContig32840174050.1 Alkaloid GS medium pass
FexcContig32840174050.2 Alkaloid GS medium pass
FexcContig36770194830.1 Alkaloid GS high pass
FexcContig38060201310.1 Alkaloid GS low borderline
FexcContig38060201320.1 Alkaloid GS low borderline
FexcContig384050203300.1 Alkaloid GS medium pass
FexcContig3910206920.1 Alkaloid GS low borderline
FexcContig3910206920.2 Alkaloid GS low borderline
FexcContig3910206920.3 Alkaloid GS low borderline
FexcContig3910206920.4 Alkaloid GS low borderline
FexcContig4220221510.1 Alkaloid GS high pass
FexcContig4220221550.1 Alkaloid GS high pass
FexcContig422720221650.1 Alkaloid GS high pass
FexcContig47780243040.1 Alkaloid GS medium pass
FexcContig49380249130.1 Alkaloid GS low borderline
FexcContig512840255910.1 Alkaloid GS high pass
FexcContig51800257990.1 Alkaloid GS high pass
FexcContig51990258680.1 Alkaloid GS low borderline
FexcContig536440265160.1 Alkaloid GS medium pass
FexcContig567660278390.1 Alkaloid GS low borderline
FexcContig574740280970.1 Alkaloid GS high pass
FexcContig59010287130.1 Alkaloid GS high pass
FexcContig59010287130.2 Alkaloid GS high pass
FexcContig5970290080.1 Alkaloid GS low borderline
FexcContig5970290080.2 Alkaloid GS low borderline