PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
FexcContig18150073820.1 Flavonoid IFS low borderline
FexcContig18290074950.2 Flavonoid IFS medium borderline
FexcContig18290074980.1 Flavonoid IFS medium borderline
FexcContig18360075640.1 Flavonoid IFS low borderline
FexcContig2050093320.1 Flavonoid IFS medium borderline
FexcContig20630094160.1 Flavonoid IFS medium borderline
FexcContig2110097320.1 Flavonoid IFS medium borderline
FexcContig21340099130.1 Flavonoid IFS medium borderline
FexcContig22040104620.1 Flavonoid IFS low borderline
FexcContig22150105030.1 Flavonoid IFS low borderline
FexcContig22150105030.2 Flavonoid IFS low borderline
FexcContig22190105230.1 Flavonoid IFS low borderline
FexcContig22440107060.1 Flavonoid IFS low borderline
FexcContig22520107510.1 Flavonoid IFS low borderline
FexcContig23190112370.1 Flavonoid IFS low borderline
FexcContig23480114610.1 Flavonoid IFS medium borderline
FexcContig239260117330.1 Flavonoid IFS low borderline
FexcContig2470123060.1 Flavonoid IFS medium borderline
FexcContig2470123070.1 Flavonoid IFS medium borderline
FexcContig24830124090.1 Flavonoid IFS medium borderline
FexcContig263970135110.1 Flavonoid IFS low borderline
FexcContig27650142600.1 Flavonoid IFS low borderline
FexcContig27720143270.1 Flavonoid IFS medium borderline
FexcContig27870144200.1 Flavonoid IFS low borderline
FexcContig27870144200.2 Flavonoid IFS low borderline
FexcContig28140146310.1 Flavonoid IFS low borderline
FexcContig28140146340.1 Flavonoid IFS low borderline
FexcContig28140146350.1 Flavonoid IFS low borderline
FexcContig28460148540.1 Flavonoid IFS low borderline
FexcContig2860149080.1 Flavonoid IFS low borderline
FexcContig2860149080.2 Flavonoid IFS low borderline
FexcContig29270153890.1 Flavonoid IFS low borderline
FexcContig30157950.1 Flavonoid IFS low borderline
FexcContig30460160800.1 Flavonoid IFS low borderline
FexcContig31720166970.1 Flavonoid IFS low borderline
FexcContig32140169910.1 Flavonoid IFS low borderline
FexcContig32510172240.1 Flavonoid IFS low borderline
FexcContig32950174540.1 Flavonoid IFS medium borderline
FexcContig33000174920.1 Flavonoid IFS medium borderline
FexcContig343870182200.1 Flavonoid IFS low borderline
FexcContig35080185680.1 Flavonoid IFS low borderline
FexcContig35480188130.1 Flavonoid IFS low borderline
FexcContig367110194560.1 Flavonoid IFS medium borderline
FexcContig37120197140.1 Flavonoid IFS low borderline
FexcContig37360197910.1 Flavonoid IFS medium borderline
FexcContig37720199590.1 Flavonoid IFS medium borderline
FexcContig37790199760.1 Flavonoid IFS medium borderline
FexcContig37890200260.1 Flavonoid IFS medium borderline
FexcContig38330202920.1 Flavonoid IFS low borderline
FexcContig38910205770.1 Flavonoid IFS low borderline