PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
FexcContig38910205770.2 Flavonoid IFS low borderline
FexcContig3910206930.1 Flavonoid IFS low borderline
FexcContig3910206930.2 Flavonoid IFS low borderline
FexcContig3930207660.1 Flavonoid IFS medium borderline
FexcContig39380208020.1 Flavonoid IFS medium borderline
FexcContig39880210280.1 Flavonoid IFS medium borderline
FexcContig39880210300.1 Flavonoid IFS medium borderline
FexcContig39920210510.1 Flavonoid IFS low borderline
FexcContig41020215530.1 Flavonoid IFS low borderline
FexcContig4200220890.1 Flavonoid IFS low borderline
FexcContig42010220910.1 Flavonoid IFS low borderline
FexcContig421560221250.1 Flavonoid IFS low borderline
FexcContig44770231090.1 Flavonoid IFS low borderline
FexcContig44900231630.1 Flavonoid IFS medium borderline
FexcContig452300233420.1 Flavonoid IFS medium borderline
FexcContig453520233940.1 Flavonoid IFS low borderline
FexcContig464860237940.1 Flavonoid IFS low borderline
FexcContig48730246540.1 Flavonoid IFS low borderline
FexcContig49380249120.1 Flavonoid IFS medium borderline
FexcContig49640249870.1 Flavonoid IFS low borderline
FexcContig49950251320.1 Flavonoid IFS low borderline
FexcContig49950251320.2 Flavonoid IFS low borderline
FexcContig50110252220.1 Flavonoid IFS medium borderline
FexcContig50251480.1 Flavonoid IFS low borderline
FexcContig50251480.2 Flavonoid IFS low borderline
FexcContig50251490.1 Flavonoid IFS low borderline
FexcContig5070253930.1 Flavonoid IFS medium borderline
FexcContig50900254630.1 Flavonoid IFS medium borderline
FexcContig5110255350.1 Flavonoid IFS medium borderline
FexcContig51430256450.1 Flavonoid IFS low borderline
FexcContig51430256450.2 Flavonoid IFS low borderline
FexcContig52050259280.1 Flavonoid IFS low borderline
FexcContig5230260360.1 Flavonoid IFS low borderline
FexcContig52410260910.1 Flavonoid IFS low borderline
FexcContig52470261180.1 Flavonoid IFS low borderline
FexcContig52470261180.2 Flavonoid IFS low borderline
FexcContig52750262420.1 Flavonoid IFS medium borderline
FexcContig52750262430.1 Flavonoid IFS medium borderline
FexcContig53210264060.1 Flavonoid IFS low borderline
FexcContig5340264490.1 Flavonoid IFS medium borderline
FexcContig5340264570.1 Flavonoid IFS low borderline
FexcContig54440268650.1 Flavonoid IFS medium borderline
FexcContig550690271440.1 Flavonoid IFS medium borderline
FexcContig550690271440.2 Flavonoid IFS medium borderline
FexcContig55390272570.1 Flavonoid IFS low borderline
FexcContig56150275790.1 Flavonoid IFS low borderline
FexcContig56550277620.1 Flavonoid IFS medium borderline
FexcContig5680278530.1 Flavonoid IFS low borderline
FexcContig57320280560.1 Flavonoid IFS medium borderline
FexcContig58040283630.1 Flavonoid IFS low borderline