PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
FexcContig58770285960.1 Flavonoid IFS medium borderline
FexcContig58790285990.1 Flavonoid IFS medium borderline
FexcContig59020287180.1 Flavonoid IFS low borderline
FexcContig59410288970.1 Flavonoid IFS low borderline
FexcContig59410288970.2 Flavonoid IFS low borderline
FexcContig59540289410.1 Flavonoid IFS medium borderline
FexcContig60291510.1 Flavonoid IFS medium borderline
FexcContig60291520.1 Flavonoid IFS medium borderline
FexcContig60291530.1 Flavonoid IFS medium borderline
FexcContig60440293180.1 Flavonoid IFS medium borderline
FexcContig624150298760.1 Flavonoid IFS low borderline
FexcContig62450298830.1 Flavonoid IFS low borderline
FexcContig6310300770.1 Flavonoid IFS medium borderline
FexcContig636810302770.1 Flavonoid IFS medium borderline
FexcContig65110306750.1 Flavonoid IFS low borderline
FexcContig65680308120.1 Flavonoid IFS medium borderline
FexcContig65990308720.1 Flavonoid IFS medium borderline
FexcContig66480309960.1 Flavonoid IFS low borderline
FexcContig68500315410.1 Flavonoid IFS medium borderline
FexcContig700980319680.1 Flavonoid IFS low borderline
FexcContig70318890.1 Flavonoid IFS medium borderline
FexcContig7050320980.1 Flavonoid IFS low borderline
FexcContig7130322930.1 Flavonoid IFS low borderline
FexcContig71940324390.1 Flavonoid IFS medium borderline
FexcContig72030324800.1 Flavonoid IFS low borderline
FexcContig73470327910.1 Flavonoid IFS low borderline
FexcContig73910328770.1 Flavonoid IFS low borderline
FexcContig740328950.1 Flavonoid IFS medium borderline
FexcContig740328960.1 Flavonoid IFS medium borderline
FexcContig740328970.1 Flavonoid IFS medium borderline
FexcContig740329040.1 Flavonoid IFS medium borderline
FexcContig7600333740.1 Flavonoid IFS low borderline
FexcContig76020333930.1 Flavonoid IFS low borderline
FexcContig760333540.1 Flavonoid IFS medium borderline
FexcContig760333540.2 Flavonoid IFS medium borderline
FexcContig7640334990.1 Flavonoid IFS low borderline
FexcContig779300339090.1 Flavonoid IFS low borderline
FexcContig7850340160.1 Flavonoid IFS low borderline
FexcContig7940342030.1 Flavonoid IFS medium borderline
FexcContig818240348440.1 Flavonoid IFS medium borderline
FexcContig820348710.1 Flavonoid IFS low borderline
FexcContig8210349440.1 Flavonoid IFS low borderline
FexcContig82360350120.1 Flavonoid IFS low borderline
FexcContig8250350430.1 Flavonoid IFS medium borderline
FexcContig830570351810.1 Flavonoid IFS low borderline
FexcContig83330352430.1 Flavonoid IFS medium borderline
FexcContig8360352950.1 Flavonoid IFS low borderline
FexcContig83960353740.1 Flavonoid IFS medium borderline
FexcContig870361260.1 Flavonoid IFS low borderline
FexcContig8740362180.1 Flavonoid IFS low borderline