PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
FexcContig1000001290.1 Alkaloid T3O medium borderline
FexcContig1000001290.2 Alkaloid T3O medium borderline
FexcContig100350001650.1 Alkaloid T3O low borderline
FexcContig10160003680.1 Alkaloid T3O medium borderline
FexcContig10160003690.1 Alkaloid T3O medium borderline
FexcContig102050004420.1 Alkaloid T3O medium borderline
FexcContig10280005350.1 Alkaloid T3O medium borderline
FexcContig10370006760.1 Alkaloid T3O medium borderline
FexcContig104290007840.1 Alkaloid T3O medium pass
FexcContig104310008000.1 Alkaloid T3O medium borderline
FexcContig104730008340.1 Alkaloid T3O medium pass
FexcContig104730008340.2 Alkaloid T3O medium pass
FexcContig10590009970.1 Alkaloid T3O medium borderline
FexcContig11000013660.1 Alkaloid T3O medium pass
FexcContig1140017460.1 Alkaloid T3O medium pass
FexcContig12070023540.1 Alkaloid T3O medium pass
FexcContig12070023540.2 Alkaloid T3O medium pass
FexcContig12190024440.1 Alkaloid T3O medium pass
FexcContig12190024440.2 Alkaloid T3O medium pass
FexcContig12420026570.1 Alkaloid T3O medium borderline
FexcContig12420026580.1 Alkaloid T3O medium borderline
FexcContig12420026580.2 Alkaloid T3O medium borderline
FexcContig12650028250.1 Alkaloid T3O medium borderline
FexcContig12750028850.1 Alkaloid T3O medium pass
FexcContig13330034810.1 Alkaloid T3O medium borderline
FexcContig13460035890.1 Alkaloid T3O medium borderline
FexcContig13490036240.1 Alkaloid T3O medium borderline
FexcContig13490036240.2 Alkaloid T3O medium borderline
FexcContig13490036240.3 Alkaloid T3O medium borderline
FexcContig13720038800.1 Alkaloid T3O medium borderline
FexcContig13720038800.2 Alkaloid T3O medium borderline
FexcContig13880040110.1 Alkaloid T3O medium borderline
FexcContig14260043340.1 Alkaloid T3O medium borderline
FexcContig14850047620.1 Alkaloid T3O medium pass
FexcContig14880047880.1 Alkaloid T3O medium borderline
FexcContig14880047900.1 Alkaloid T3O medium borderline
FexcContig15300051700.1 Alkaloid T3O medium borderline
FexcContig16230058760.1 Alkaloid T3O medium borderline
FexcContig16230058790.1 Alkaloid T3O medium borderline
FexcContig16260058870.1 Alkaloid T3O low borderline
FexcContig16300059290.1 Alkaloid T3O medium pass
FexcContig1630059230.1 Alkaloid T3O medium borderline
FexcContig16440060300.1 Alkaloid T3O medium borderline
FexcContig16530061100.1 Alkaloid T3O medium pass
FexcContig16530061110.1 Alkaloid T3O medium pass
FexcContig17330067500.1 Alkaloid T3O medium borderline
FexcContig1750068790.1 Alkaloid T3O low borderline
FexcContig17940072080.1 Alkaloid T3O medium borderline
FexcContig18150073820.2 Alkaloid T3O medium pass
FexcContig18290074950.1 Alkaloid T3O medium borderline