PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
FexcContig18290074950.2 Alkaloid T3O medium borderline
FexcContig18290074950.3 Alkaloid T3O medium borderline
FexcContig18290074980.1 Alkaloid T3O medium borderline
FexcContig18360075640.1 Alkaloid T3O medium pass
FexcContig193160083740.1 Alkaloid T3O medium borderline
FexcContig19800086970.1 Alkaloid T3O medium borderline
FexcContig2050093320.1 Alkaloid T3O medium borderline
FexcContig20630094160.1 Alkaloid T3O medium borderline
FexcContig20940096250.1 Alkaloid T3O medium borderline
FexcContig2110097320.1 Alkaloid T3O medium borderline
FexcContig2110097320.2 Alkaloid T3O medium borderline
FexcContig21340099130.1 Alkaloid T3O medium borderline
FexcContig22040104620.1 Alkaloid T3O medium pass
FexcContig22440107060.1 Alkaloid T3O medium pass
FexcContig22520107510.1 Alkaloid T3O medium pass
FexcContig2300110870.1 Alkaloid T3O medium borderline
FexcContig2300110870.2 Alkaloid T3O medium borderline
FexcContig2470123060.1 Alkaloid T3O medium borderline
FexcContig2470123070.1 Alkaloid T3O medium borderline
FexcContig24830124090.1 Alkaloid T3O medium borderline
FexcContig26210134100.1 Alkaloid T3O medium pass
FexcContig2660136140.1 Alkaloid T3O medium borderline
FexcContig26730136830.1 Alkaloid T3O low borderline
FexcContig27720143270.1 Alkaloid T3O medium borderline
FexcContig28460148540.1 Alkaloid T3O medium pass
FexcContig2860149080.1 Alkaloid T3O medium pass
FexcContig2860149080.2 Alkaloid T3O medium pass
FexcContig29270153890.1 Alkaloid T3O medium pass
FexcContig29670156010.1 Alkaloid T3O medium borderline
FexcContig29670156020.1 Alkaloid T3O medium borderline
FexcContig300158340.1 Alkaloid T3O medium borderline
FexcContig30157950.1 Alkaloid T3O medium pass
FexcContig3120164280.1 Alkaloid T3O medium borderline
FexcContig32140169910.2 Alkaloid T3O medium pass
FexcContig32950174540.1 Alkaloid T3O medium borderline
FexcContig33000174920.1 Alkaloid T3O medium borderline
FexcContig33740178140.1 Alkaloid T3O low borderline
FexcContig35080185680.1 Alkaloid T3O medium pass
FexcContig367110194560.1 Alkaloid T3O medium borderline
FexcContig37360197910.1 Alkaloid T3O medium borderline
FexcContig37720199590.1 Alkaloid T3O medium borderline
FexcContig37790199760.1 Alkaloid T3O medium borderline
FexcContig37890200260.1 Alkaloid T3O medium borderline
FexcContig37890200270.1 Alkaloid T3O medium borderline
FexcContig38910205770.1 Alkaloid T3O low borderline
FexcContig38910205770.2 Alkaloid T3O low borderline
FexcContig3910206930.1 Alkaloid T3O low borderline
FexcContig3910206930.2 Alkaloid T3O low borderline
FexcContig3930207660.1 Alkaloid T3O medium borderline
FexcContig39880210280.1 Alkaloid T3O medium borderline