PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
FexcContig39880210290.1 Alkaloid T3O medium borderline
FexcContig39880210300.1 Alkaloid T3O medium borderline
FexcContig40210212040.1 Alkaloid T3O medium borderline
FexcContig40980215100.1 Alkaloid T3O medium borderline
FexcContig41820219870.1 Alkaloid T3O medium pass
FexcContig429480224370.1 Alkaloid T3O medium borderline
FexcContig43280225750.1 Alkaloid T3O medium borderline
FexcContig44770231090.1 Alkaloid T3O medium pass
FexcContig44900231630.1 Alkaloid T3O medium borderline
FexcContig452300233420.1 Alkaloid T3O medium borderline
FexcContig482700244920.1 Alkaloid T3O medium borderline
FexcContig48380245150.1 Alkaloid T3O medium pass
FexcContig49380249120.1 Alkaloid T3O medium borderline
FexcContig5000251760.1 Alkaloid T3O medium borderline
FexcContig50110252220.1 Alkaloid T3O medium borderline
FexcContig50310252880.1 Alkaloid T3O medium borderline
FexcContig50400253170.1 Alkaloid T3O medium pass
FexcContig5070253930.1 Alkaloid T3O medium borderline
FexcContig5110255350.1 Alkaloid T3O medium borderline
FexcContig51180255650.1 Alkaloid T3O medium borderline
FexcContig52050259280.1 Alkaloid T3O low borderline
FexcContig5220260030.1 Alkaloid T3O medium pass
FexcContig5230260360.1 Alkaloid T3O medium pass
FexcContig52470261180.1 Alkaloid T3O low borderline
FexcContig52470261180.2 Alkaloid T3O low borderline
FexcContig52750262420.1 Alkaloid T3O medium borderline
FexcContig5340264490.1 Alkaloid T3O medium borderline
FexcContig5340264570.1 Alkaloid T3O low borderline
FexcContig54440268650.1 Alkaloid T3O medium borderline
FexcContig550690271440.2 Alkaloid T3O medium borderline
FexcContig55390272570.1 Alkaloid T3O low borderline
FexcContig558580274700.1 Alkaloid T3O medium borderline
FexcContig56550277600.1 Alkaloid T3O medium borderline
FexcContig56550277620.1 Alkaloid T3O medium borderline
FexcContig5680278530.1 Alkaloid T3O medium pass
FexcContig57170279920.1 Alkaloid T3O medium borderline
FexcContig57320280560.1 Alkaloid T3O medium borderline
FexcContig59020287180.1 Alkaloid T3O medium pass
FexcContig59540289410.1 Alkaloid T3O medium borderline
FexcContig60280292720.1 Alkaloid T3O medium borderline
FexcContig60291510.1 Alkaloid T3O medium borderline
FexcContig60291520.1 Alkaloid T3O medium borderline
FexcContig60291530.1 Alkaloid T3O medium borderline
FexcContig6140296390.1 Alkaloid T3O medium pass
FexcContig6310300770.1 Alkaloid T3O medium borderline
FexcContig63580302490.1 Alkaloid T3O low borderline
FexcContig652020306980.1 Alkaloid T3O medium pass
FexcContig65680308120.1 Alkaloid T3O medium borderline
FexcContig65990308720.1 Alkaloid T3O medium borderline
FexcContig663820309700.1 Alkaloid T3O medium borderline