PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
FexcContig66480309960.1 Alkaloid T3O medium pass
FexcContig67120311850.1 Alkaloid T3O medium borderline
FexcContig689200316670.1 Alkaloid T3O medium borderline
FexcContig700980319680.1 Alkaloid T3O high pass
FexcContig70318890.1 Alkaloid T3O medium borderline
FexcContig7050320980.1 Alkaloid T3O medium pass
FexcContig7200324730.1 Alkaloid T3O medium borderline
FexcContig72030324800.1 Alkaloid T3O medium pass
FexcContig72800326610.1 Alkaloid T3O medium borderline
FexcContig73470327910.1 Alkaloid T3O medium pass
FexcContig740328950.1 Alkaloid T3O medium borderline
FexcContig740328960.1 Alkaloid T3O medium borderline
FexcContig740328970.1 Alkaloid T3O medium borderline
FexcContig740329040.1 Alkaloid T3O medium borderline
FexcContig7560332530.1 Alkaloid T3O medium borderline
FexcContig76020333930.1 Alkaloid T3O medium pass
FexcContig76630335570.1 Alkaloid T3O medium borderline
FexcContig783900339920.1 Alkaloid T3O medium borderline
FexcContig7850340160.1 Alkaloid T3O medium pass
FexcContig7860340390.1 Alkaloid T3O medium borderline
FexcContig7880340820.1 Alkaloid T3O medium borderline
FexcContig7940342030.1 Alkaloid T3O medium borderline
FexcContig811840347240.1 Alkaloid T3O medium borderline
FexcContig820348710.1 Alkaloid T3O medium pass
FexcContig8250350430.1 Alkaloid T3O medium borderline
FexcContig830570351810.1 Alkaloid T3O medium pass
FexcContig8340352630.1 Alkaloid T3O medium borderline
FexcContig83960353740.1 Alkaloid T3O medium borderline
FexcContig85340357450.1 Alkaloid T3O medium borderline
FexcContig86680360620.1 Alkaloid T3O medium borderline
FexcContig8740362180.1 Alkaloid T3O medium pass
FexcContig8790363410.1 Alkaloid T3O medium borderline
FexcContig8790363410.2 Alkaloid T3O medium borderline
FexcContig886180365400.1 Alkaloid T3O low borderline
FexcContig886180365400.2 Alkaloid T3O low borderline
FexcContig886780365530.1 Alkaloid T3O medium borderline
FexcContig88700365680.1 Alkaloid T3O low borderline
FexcContig8940367630.1 Alkaloid T3O medium borderline
FexcContig8940367640.1 Alkaloid T3O medium pass
FexcContig89550367940.1 Alkaloid T3O medium borderline
FexcContig8980368410.1 Alkaloid T3O low borderline
FexcContig90870371040.1 Alkaloid T3O medium borderline
FexcContig91330371650.1 Alkaloid T3O medium pass
FexcContig92120373660.1 Alkaloid T3O medium borderline
FexcContig92120373660.2 Alkaloid T3O medium borderline
FexcContig92480374380.1 Alkaloid T3O low borderline
FexcContig95590380310.1 Alkaloid T3O medium pass
FexcContig9800385220.1 Alkaloid T3O low borderline